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Related papers: BiCA: Effective Biomedical Dense Retrieval with Ci…

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Due to the rapid development of World Wide Web (WWW) and imaging technology, more and more images are available in the Internet and stored in databases. Searching the related images by the querying image is becoming tedious and difficult.…

Computer Vision and Pattern Recognition · Computer Science 2010-08-20 Md. Saiful Islam , Md. Haider Ali

Many practical applications of AI in medicine consist of semi-supervised discovery: The investigator aims to identify features of interest at a resolution more fine-grained than that of the available human labels. This is often the scenario…

Computation and Language · Computer Science 2020-04-08 Allen Schmaltz , Andrew Beam

In implicit collaborative filtering, hard negative mining techniques are developed to accelerate and enhance the recommendation model learning. However, the inadvertent selection of false negatives remains a major concern in hard negative…

Information Retrieval · Computer Science 2024-03-29 Kexin Shi , Jing Zhang , Linjiajie Fang , Wenjia Wang , Bingyi Jing

One of the first steps in many text-based social science studies is to retrieve documents that are relevant for the analysis from large corpora of otherwise irrelevant documents. The conventional approach in social science to address this…

Information Retrieval · Computer Science 2022-05-04 Sandra Wankmüller

Information retrieval (IR) is essential in biomedical knowledge acquisition and clinical decision support. While recent progress has shown that language model encoders perform better semantic retrieval, training such models requires…

Information Retrieval · Computer Science 2024-01-17 Qiao Jin , Won Kim , Qingyu Chen , Donald C. Comeau , Lana Yeganova , W. John Wilbur , Zhiyong Lu

Large retail outlets offer products that may be domain-specific, and this requires having a model that can understand subtle differences in similar items. Sampling techniques used to train these models are most of the time, computationally…

Information Retrieval · Computer Science 2025-11-04 Uthman Jinadu , Siawpeng Er , Le Yu , Chen Liang , Bingxin Li , Yi Ding , Aleksandar Velkoski

The Precision Medicine Initiative states that treatments for a patient should take into account not only the patient's disease, but his/her specific genetic variation as well. The vast biomedical literature holds the potential for…

Information Retrieval · Computer Science 2019-04-22 Jiaming Qu , Yue Wang

Dense retrieval systems have been widely used in various NLP applications. However, their vulnerabilities to potential attacks have been underexplored. This paper investigates a novel attack scenario where the attackers aim to mislead the…

Computation and Language · Computer Science 2025-08-26 Quanyu Long , Yue Deng , LeiLei Gan , Wenya Wang , Sinno Jialin Pan

Effective biomedical information retrieval requires modeling domain semantics and hierarchical relationships among biomedical texts. Existing biomedical generative retrievers build on coarse binary relevance signals, limiting their ability…

Information Retrieval · Computer Science 2026-04-20 Mengfei Lan , Lecheng Zheng , Halil Kilicoglu

The incompleteness of positive labels and the presence of many unlabelled instances are common problems in binary classification applications such as in review helpfulness classification. Various studies from the classification literature…

Information Retrieval · Computer Science 2020-08-17 Xi Wang , Iadh Ounis , Craig Macdonald

A common retrieve-and-rerank paradigm involves retrieving relevant candidates from a broad set using a fast bi-encoder (BE), followed by applying expensive but accurate cross-encoders (CE) to a limited candidate set. However, relying on…

Computation and Language · Computer Science 2024-10-28 Jonghyun Song , Cheyon Jin , Wenlong Zhao , Andrew McCallum , Jay-Yoon Lee

Neural Encoders are frequently used in the NLP domain to perform dense retrieval tasks, for instance, to generate the candidate documents for a given query in question-answering tasks. However, sparse annotation and label noise in the…

Machine Learning · Computer Science 2025-12-16 Arnab Sharma

Document screening is a central task within Evidenced Based Medicine, which is a clinical discipline that supplements scientific proof to back medical decisions. Given the recent advances in DL (Deep Learning) methods applied to Information…

Information Retrieval · Computer Science 2021-04-20 Alexandros Ioannidis

We present an overview of the SCIDOCA 2025 Shared Task, which focuses on citation discovery and prediction in scientific documents. The task is divided into three subtasks: (1) Citation Discovery, where systems must identify relevant…

Digital Libraries · Computer Science 2025-09-30 An Dao , Vu Tran , Le-Minh Nguyen , Yuji Matsumoto

We present a scalable, AI-powered system that identifies and extracts evidence-based behavioral nudges from unstructured biomedical literature. Nudges are subtle, non-coercive interventions that influence behavior without limiting choice,…

E-commerce recommendation and search commonly rely on sparse keyword matching (e.g., BM25), which breaks down under vocabulary mismatch when user intent has limited lexical overlap with product metadata. We cast content-based recommendation…

Machine Learning · Computer Science 2026-02-03 Mritunjay Pandey

Dense retrieval has become the new paradigm in passage retrieval. Despite its effectiveness on typo-free queries, it is not robust when dealing with queries that contain typos. Current works on improving the typo-robustness of dense…

Information Retrieval · Computer Science 2024-03-19 Georgios Sidiropoulos , Evangelos Kanoulas

Recent advances in open-domain QA have led to strong models based on dense retrieval, but only focused on retrieving textual passages. In this work, we tackle open-domain QA over tables for the first time, and show that retrieval can be…

Computation and Language · Computer Science 2021-06-10 Jonathan Herzig , Thomas Müller , Syrine Krichene , Julian Martin Eisenschlos

Tools to explore scientific literature are essential for scientists, especially in biomedicine, where about a million new papers are published every year. Many such tools provide users the ability to search for specific entities (e.g.…

Computation and Language · Computer Science 2021-07-05 Sunil Mohan , Rico Angell , Nick Monath , Andrew McCallum

This paper introduces a novel method for closed information extraction. The method employs a discriminative approach that incorporates type and entity-specific information to improve relation extraction accuracy, particularly benefiting…

Computation and Language · Computer Science 2025-06-23 Cedric Möller , Ricardo Usbeck