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Early, reliable detection of disease outbreaks is a critical problem today. This paper reports an investigation of the use of causal Bayesian networks to model spatio-temporal patterns of a non-contagious disease (respiratory anthrax…

Applications · Statistics 2012-07-19 Gregory F. Cooper , Denver Dash , John Levander , Weng-Keen Wong , William Hogan , Michael Wagner

In this paper, we introduce Temporal Multiresolution Graph Neural Networks (TMGNN), the first architecture that both learns to construct the multiscale and multiresolution graph structures and incorporates the time-series signals to capture…

Machine Learning · Computer Science 2022-06-30 Truong Son Hy , Viet Bach Nguyen , Long Tran-Thanh , Risi Kondor

Detecting and preventing outbreaks of mosquito-borne diseases such as Dengue and Zika in Brasil and other tropical regions has long been a priority for governments in affected areas. Streaming social media content, such as Twitter, is…

Social and Information Networks · Computer Science 2016-05-04 Paolo Missier , Alexander Romanovsky , Tudor Miu , Atinder Pal , Michael Daniilakis , Alessandro Garcia , Diego Cedrim , Leonardo da Silva Sousa

In the age of digital epidemiology, epidemiologists are faced by an increasing amount of data of growing complexity and dimensionality. Machine learning is a set of powerful tools that can help to analyze such enormous amounts of data. This…

Machine Learning · Statistics 2026-02-19 Marvin N. Wright , Lukas Burk , Pegah Golchian , Jan Kapar , Niklas Koenen , Sophie Hanna Langbein

Effective epidemic modeling is essential for managing public health crises, requiring robust methods to predict disease spread and optimize resource allocation. This study introduces a novel deep learning framework that advances time series…

Image and Video Processing · Electrical Eng. & Systems 2026-01-19 Mousa Alizadeh , Mohammad Hossein Samaei , Azam Seilsepour , Alireza Monavarian , Mohammad TH Beheshti

The spread of COVID-19 has become a significant and troubling aspect of society in 2020. With millions of cases reported across countries, new outbreaks have occurred and followed patterns of previously affected areas. Many disease…

Computation and Language · Computer Science 2020-10-19 Sharon Levy , William Yang Wang

The outburst of COVID-19 in late 2019 was the start of a health crisis that shook the world and took millions of lives in the ensuing years. Many governments and health officials failed to arrest the rapid circulation of infection in their…

Machine Learning · Computer Science 2022-12-20 Mehrdad Fazli , Heman Shakeri

This study presents a neural network-enhanced approach to modeling disease spread dynamics over time and space. Neural networks are used to estimate time-varying parameters, with two calibration methods explored: Approximate Bayesian…

Quantitative Methods · Quantitative Biology 2024-10-29 Randy L. Caga-anan

Emerging infectious diseases are existential threats to human health and global stability. The recent outbreaks of the novel coronavirus COVID-19 have rapidly formed a global pandemic, causing hundreds of thousands of infections and huge…

Applications · Statistics 2020-06-02 Chuansai Zhou , Wen Yuan , Jun Wang , Haiyong Xu , Yong Jiang , Xinmin Wang , Qiuzi Han Wen , Pingwen Zhang

Epidemic forecasting has become an integral part of real-time infectious disease outbreak response. While collaborative ensembles composed of statistical and machine learning models have become the norm for real-time forecasting,…

Augmentation of disease diagnosis and decision-making in healthcare with machine learning algorithms is gaining much impetus in recent years. In particular, in the current epidemiological situation caused by COVID-19 pandemic, swift and…

Computers and Society · Computer Science 2021-02-23 Leopold Franz , Yash Raj Shrestha , Bibek Paudel

Diffusion processes in networks are increasingly used to model the spread of information and social influence. In several applications in computational sustainability such as the spread of wildlife, infectious diseases and traffic mobility…

Social and Information Networks · Computer Science 2013-09-27 Akshat Kumar , Daniel Sheldon , Biplav Srivastava

Mathematical modeling of disease outbreaks can infer the future trajectory of an epidemic, which can inform policy decisions. Another task is inferring the origin of a disease, which is relatively difficult with current mathematical models.…

Physics and Society · Physics 2022-08-31 Mehrad Ansari , David Soriano-Paños , Gourab Ghoshal , Andrew D. White

The COVID-19 pandemic has brought forth the importance of epidemic forecasting for decision makers in multiple domains, ranging from public health to the economy as a whole. While forecasting epidemic progression is frequently…

Machine Learning · Computer Science 2022-07-21 Alexander Rodríguez , Harshavardhan Kamarthi , Pulak Agarwal , Javen Ho , Mira Patel , Suchet Sapre , B. Aditya Prakash

Practical machine learning applications involving time series data, such as firewall log analysis to proactively detect anomalous behavior, are concerned with real time analysis of streaming data. Consequently, we need to update the ML…

We study epidemic arrival times in meta-population disease models through the lens of front propagation into unstable states. We demonstrate that several features of invasion fronts in the PDE context are also relevant to the network case.…

Populations and Evolution · Quantitative Biology 2022-10-19 Ashley Armbruster , Matt Holzer , Noah Roselli , Lena Underwood

Early Warning Signals (EWSs) are vital for implementing preventive measures before a disease turns into a pandemic. While new diseases exhibit unique behaviors, they often share fundamental characteristics from a dynamical systems…

Machine Learning · Computer Science 2025-01-15 Reza Miry , Amit K. Chakraborty , Russell Greiner , Mark A. Lewis , Hao Wang , Tianyu Guan , Pouria Ramazi

A prompt public health response to a new epidemic relies on the ability to monitor and predict its evolution in real time as data accumulate. The 2009 A/H1N1 outbreak in the UK revealed pandemic data as noisy, contaminated, potentially…

Accurate forecasts of COVID-19 is central to resource management and building strategies to deal with the epidemic. We propose a heterogeneous infection rate model with human mobility for epidemic modeling, a preliminary version of which we…

Populations and Evolution · Quantitative Biology 2020-05-06 Ajitesh Srivastava , Viktor K. Prasanna

Early detection of disease outbreaks is of paramount importance to implementing intervention strategies to mitigate the severity and duration of the outbreak. We build methodology that utilizes the characteristic profile of disease…

Methodology · Statistics 2012-01-20 Michael D. Porter , Jarad B. Niemi , Brian J. Reich