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Graph neural network (GNN) link prediction is increasingly deployed in citation, collaboration, and online social networks to recommend academic literature, collaborators, and friends. While prior research has investigated the dyadic…

Machine Learning · Computer Science 2024-06-06 Arjun Subramonian , Levent Sagun , Yizhou Sun

Large Language Models (LLMs) have demonstrated remarkable performance in code intelligence tasks such as code generation, summarization, and translation. However, their reliance on linearized token sequences limits their ability to…

Computation and Language · Computer Science 2025-12-09 Zeqi Chen , Zhaoyang Chu , Yi Gui , Feng Guo , Yao Wan , Chuan Shi

Nuclei classification is a critical step in computer-aided diagnosis with histopathology images. In the past, various methods have employed graph neural networks (GNN) to analyze cell graphs that model inter-cell relationships by…

Computer Vision and Pattern Recognition · Computer Science 2024-02-21 Wei Lou , Guanbin Li , Xiang Wan , Haofeng Li

Graphs are a common model for complex relational data such as social networks and protein interactions, and such data can evolve over time (e.g., new friendships) and be noisy (e.g., unmeasured interactions). Link prediction aims to predict…

Social and Information Networks · Computer Science 2021-07-01 Abhay Singh , Qian Huang , Sijia Linda Huang , Omkar Bhalerao , Horace He , Ser-Nam Lim , Austin R. Benson

The Lifelong Multi-Label (LML) image recognition builds an online class-incremental classifier in a sequential multi-label image recognition data stream. The key challenges of LML image recognition are the construction of label…

Computer Vision and Pattern Recognition · Computer Science 2022-03-14 Kaile Du , Fan Lyu , Fuyuan Hu , Linyan Li , Wei Feng , Fenglei Xu , Qiming Fu

Multi-scale biomedical knowledge networks are expanding with emerging experimental technologies that generates multi-scale biomedical big data. Link prediction is increasingly used especially in bipartite biomedical networks to identify…

Social and Information Networks · Computer Science 2022-02-25 Jinjiang Guo , Jie Li , Dawei Leng , Lurong Pan

Capturing semantic consistency among nodes is crucial for effective graph representation learning. Existing approaches typically rely on $k$-nearest neighbors ($k$NN) or other node-level full search algorithms (FSA) to mine semantic…

Artificial Intelligence · Computer Science 2026-05-06 Genhao Tian , Taihua Xu , Shuyin Xia , Qinghua Zhang , Jie Yang , Jianjun Chen

The ability of knowledge graphs to represent complex relationships at scale has led to their adoption for various needs including knowledge representation, question-answering, and recommendation systems. Knowledge graphs are often…

Computation and Language · Computer Science 2023-05-18 Jason Youn , Ilias Tagkopoulos

Continual graph learning (CGL) studies the problem of learning from an infinite stream of graph data, consolidating historical knowledge, and generalizing it to the future task. At once, only current graph data are available. Although some…

Machine Learning · Computer Science 2023-08-17 Qinghua Shen , Weijieying Ren , Wei Qin

The rise of graph-structured data has driven major advances in Graph Machine Learning (GML), where graph embeddings (GEs) map features from Knowledge Graphs (KGs) into vector spaces, enabling tasks like node classification and link…

Machine Learning · Computer Science 2026-01-27 Rosario Napoli , Gabriele Morabito , Antonio Celesti , Massimo Villari , Maria Fazio

Heterogeneous graphs, which contain nodes and edges of multiple types, are prevalent in various domains, including bibliographic networks, social media, and knowledge graphs. As a fundamental task in analyzing heterogeneous graphs,…

Information Retrieval · Computer Science 2023-05-02 Linhao Luo , Yixiang Fang , Moli Lu , Xin Cao , Xiaofeng Zhang , Wenjie Zhang

Relational deep learning (RDL) settles among the most exciting advances in machine learning for relational databases, leveraging the representational power of message passing graph neural networks (GNNs) to derive useful knowledge and run…

Information Retrieval · Computer Science 2025-03-24 Alejandro Ariza-Casabona , Nikos Kanakaris , Daniele Malitesta

Graph convolutional networks (GCNs) -- which are effective in modeling graph structures -- have been increasingly popular in knowledge graph completion (KGC). GCN-based KGC models first use GCNs to generate expressive entity representations…

Artificial Intelligence · Computer Science 2022-02-14 Zhanqiu Zhang , Jie Wang , Jieping Ye , Feng Wu

Semi-supervised learning on graphs is an important problem in the machine learning area. In recent years, state-of-the-art classification methods based on graph neural networks (GNNs) have shown their superiority over traditional ones such…

Machine Learning · Computer Science 2021-03-05 Cheng Yang , Jiawei Liu , Chuan Shi

Automated classification of clinical transcriptions into medical specialties is essential for routing, coding, and clinical decision support, yet prior work on the widely used MTSamples benchmark suffers from severe data leakage caused by…

Artificial Intelligence · Computer Science 2026-03-25 Pronob Kumar Barman , Pronoy Kumar Barman

Class imbalance is pervasive in real-world graph datasets, where the majority of annotated nodes belong to a small set of classes (majority classes), leaving many other classes (minority classes) with only a handful of labeled nodes. Graph…

Machine Learning · Computer Science 2024-12-31 Abdullah Alchihabi , Hao Yan , Yuhong Guo

Graph Neural Networks (GNNs) have achieved state-of-the-art performance for link prediction. However, GNNs suffer from poor interpretability, which limits their adoptions in critical scenarios that require knowing why certain links are…

Machine Learning · Computer Science 2023-05-23 Huaisheng Zhu , Dongsheng Luo , Xianfeng Tang , Junjie Xu , Hui Liu , Suhang Wang

Graph Neural Networks (GNNs) have attracted increasing attention in recent years and have achieved excellent performance in semi-supervised node classification tasks. The success of most GNNs relies on one fundamental assumption, i.e., the…

Machine Learning · Computer Science 2024-12-03 Junchao Lin , Yuan Wan , Jingwen Xu , Xingchen Qi

Graph neural networks (GNNs) have been demonstrated to be powerful in modeling graph-structured data. However, training GNNs usually requires abundant task-specific labeled data, which is often arduously expensive to obtain. One effective…

Machine Learning · Computer Science 2020-06-30 Ziniu Hu , Yuxiao Dong , Kuansan Wang , Kai-Wei Chang , Yizhou Sun

Graph learning plays a vital role in mining and analyzing complex relationships within graph data and has been widely applied to real-world scenarios such as social, citation, and e-commerce networks. Foundation models in computer vision…

Machine Learning · Computer Science 2025-11-19 Haihong Zhao , Zhixun Li , Chenyi Zi , Aochuan Chen , Fugee Tsung , Jia Li , Jeffrey Xu Yu