Related papers: PyGress: Tool for Analyzing the Progression of Cod…

Understanding how the brain functions is one of the biggest challenges of our time. The analysis of experimentally recorded neural firing patterns (spike trains) plays a crucial role in addressing this problem. Here, the PySpike library is…

This paper presents Deepchecks, a Python library for comprehensively validating machine learning models and data. Our goal is to provide an easy-to-use library comprising of many checks related to various types of issues, such as model…

As programming education becomes more widespread, many college students from non-computer science backgrounds begin learning programming. Collaborative programming emerges as an effective method for instructors to support novice students in…

Refactoring, the process of improving the code structure of a software system without altering its behavior, is crucial for managing code evolution in software development. Identifying refactoring actions in source code is essential for…

Open-source software (OSS) plays a crucial role in modern software development. Utilizing OSS code can greatly accelerate software development, reduce redundancy, and enhance reliability. Python, a widely adopted programming language, is…

This paper describes the design and use of the graph-based parsing framework and toolkit UniParse, released as an open-source python software package. UniParse as a framework novelly streamlines research prototyping, development and…

This paper illustrates an empirical study of the working efficiency of machine learning techniques in classifying code review text by semantic meaning. The code review comments from the source control repository in GitHub were extracted for…

The rapid adoption of AI coding agents is fundamentally shifting software developers' roles from code authors to code reviewers. While developers spend a significant portion of their time reading and comprehending code, the linguistic…

The open-source PyNX toolkit [Favre-Nicolin et al (2011) arXiv:1010.2641, Mandula et al (2016)] has been extended to provide tools for coherent X-ray imaging data analysis and simulation. All calculations can be executed on graphical…

Open source software (OSS) is essential for modern society and, while substantial research has been done on individual (typically central) projects, only a limited understanding of the periphery of the entire OSS ecosystem exists. For…

Software comprehension can be extremely time-consuming due to the ever-growing size of codebases. Consequently, there is an increasing need to accelerate the code comprehension process to facilitate maintenance and reduce associated costs.…

PySCF is a general-purpose electronic structure platform designed from the ground up to emphasize code simplicity, both to aid new method development, as well as for flexibility in computational workflow. The package provides a wide range…

Over the past decade, the Python-based Simulations of Chemistry Framework (PySCF) has developed into a widely used open-source platform for electronic structure theory and quantum chemical method development. This article reviews the major…

Graph representations of programs are commonly a central element of machine learning for code research. We introduce an open source Python library python_graphs that applies static analysis to construct graph representations of Python…

As modern software extensively uses free open source packages as dependencies, developers have to regularly pull in new third-party code through frequent updates. However, without a proper review of every incoming change, vulnerable and…

The source code suggestions provided by current IDEs are mostly dependent on static type learning. These suggestions often end up proposing irrelevant suggestions for a peculiar context. Recently, deep learning-based approaches have shown…

The Python Package Index (PyPI) has become a target for malicious actors, yet existing detection tools generate false positive rates of 15-30%, incorrectly flagging one-third of legitimate packages as malicious. This problem arises because…

We consider the problem of identifying the provenance of free/open source software (FOSS) and specifically the need of identifying where reused source code has been copied from. We propose a lightweight approach to solve the problem based…

Developing an algorithm for a visualization prototype often involves the direct comparison of different development stages and design decisions, and even minor modifications may dramatically affect the results. While existing development…

Pykg2vec is an open-source Python library for learning the representations of the entities and relations in knowledge graphs. Pykg2vec's flexible and modular software architecture currently implements 16 state-of-the-art knowledge graph…