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The increase in the dimensionality of neural embedding models has enhanced the accuracy of semantic search capabilities but also amplified the computational demands for Approximate Nearest Neighbor Searches (ANNS). This complexity poses…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-01 Jingjia Luo , Mingxing Zhang , Kang Chen , Xia Liao , Yingdi Shan , Jinlei Jiang , Yongwei Wu

This paper studies density-based clustering of point sets. These methods use dense regions of points to detect clusters of arbitrary shapes. In particular, we study variants of density peaks clustering, a popular type of algorithm that has…

Data Structures and Algorithms · Computer Science 2025-06-04 Shangdi Yu , Joshua Engels , Yihao Huang , Julian Shun

The advent of highly accurate protein structure prediction methods has fueled an exponential expansion of the protein structure database. Consequently, there is a rising demand for rapid and precise structural homolog search. Traditional…

Biomolecules · Quantitative Biology 2023-12-01 Yuan Liu , Hong-Bin Shen

High-performance analysis of unstructured data like graphs now is critical for applications ranging from business intelligence to genome analysis. Towards this, data centers hold large graphs in memory to serve multiple concurrent queries…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-27 Emory Smith , Shannon Kuntz , Jason Riedy , Martin Deneroff

Much of the recent improvement in neural networks for computer vision has resulted from discovery of new networks architectures. Most prior work has used the performance of candidate models following limited training to automatically guide…

Computer Vision and Pattern Recognition · Computer Science 2019-09-09 Pouya Bashivan , Mark Tensen , James J DiCarlo

In this paper we study a scheduling problem arising from executing numerical simulations on HPC architectures. With a constant number of parallel machines, the objective is to minimize the makespan under memory constraints for the machines.…

Data Structures and Algorithms · Computer Science 2022-02-18 Eric Angel , Sébastien Morais , Damien Regnault

Graph neural networks (GNNs) leverage the connectivity and structure of real-world graphs to learn intricate properties and relationships between nodes. Many real-world graphs exceed the memory capacity of a GPU due to their sheer size, and…

Machine Learning · Computer Science 2025-10-30 Aditya K. Ranjan , Siddharth Singh , Cunyang Wei , Abhinav Bhatele

Graph similarity computation aims to predict a similarity score between one pair of graphs to facilitate downstream applications, such as finding the most similar chemical compounds similar to a query compound or Fewshot 3D Action…

Machine Learning · Computer Science 2021-01-06 Haoyan Xu , Ziheng Duan , Jie Feng , Runjian Chen , Qianru Zhang , Zhongbin Xu , Yueyang Wang

Graph similarity computation is one of the core operations in many graph-based applications, such as graph similarity search, graph database analysis, graph clustering, etc. Since computing the exact distance/similarity between two graphs…

Machine Learning · Computer Science 2021-05-18 Yunsheng Bai , Hao Ding , Yizhou Sun , Wei Wang

Filtered approximate nearest neighbor search (ANNS) restricts the search to data objects whose attributes satisfy a given filter and retrieves the top-$K$ objects that are most semantically similar to the query object. Many graph-based ANNS…

Databases · Computer Science 2025-11-04 Tianming Wu , Dixin Tang

Graph matching is a fundamental tool in computer vision and pattern recognition. In this paper, we introduce an algorithm for graph matching based on the proximal operator, referred to as differentiable proximal graph matching (DPGM).…

Computer Vision and Pattern Recognition · Computer Science 2024-05-28 Haoru Tan , Chuang Wang , Xu-Yao Zhang , Cheng-Lin Liu

Federated learning has emerged in the last decade as a distributed optimization paradigm due to the rapidly increasing number of portable devices able to support the heavy computational needs related to the training of machine learning…

Machine Learning · Computer Science 2024-10-10 Emanuel Buttaci , Giuseppe Carlo Calafiore

Community search is a derivative of community detection that enables online and personalized discovery of communities and has found extensive applications in massive real-world networks. Recently, there needs to be more focus on the…

Social and Information Networks · Computer Science 2024-01-22 Wei Ai , CanHao Xie , Tao Meng , Yinghao Wu , KeQin Li

Graph-based approximate nearest neighbor search has attracted more and more attentions due to its online search advantages. Numbers of methods studying the enhancement of speed and recall have been put forward. However, few of them focus on…

Information Retrieval · Computer Science 2021-02-10 Kang Zhao , Pan Pan , Yun Zheng , Yanhao Zhang , Changxu Wang , Yingya Zhang , Yinghui Xu , Rong Jin

With the surging popularity of approximate near-neighbor search (ANNS), driven by advances in neural representation learning, the ability to serve queries accompanied by a set of constraints has become an area of intense interest. While the…

Information Retrieval · Computer Science 2023-08-30 Gaurav Gupta , Jonah Yi , Benjamin Coleman , Chen Luo , Vihan Lakshman , Anshumali Shrivastava

Retrieval-Augmented Generation (RAG) systems critically depend on retrieval quality, yet no systematic comparison of modern retrieval methods exists for heterogeneous documents containing both text and tabular data. We benchmark ten…

Information Retrieval · Computer Science 2026-04-03 Meftun Akarsu , Recep Kaan Karaman , Christopher Mierbach

Academic Search is a search task aimed to manage and retrieve scientific documents like journal articles and conference papers. Personalization in this context meets individual researchers' needs by leveraging, through user profiles, the…

Information Retrieval · Computer Science 2025-07-21 Pranav Kasela , Gabriella Pasi , Raffaele Perego

Hybrid search, which jointly optimizes vector similarity and structured predicate filtering, has become a fundamental building block for modern AI-driven systems. While recent predicate-aware ANN indices improve filtering efficiency on…

Databases · Computer Science 2026-04-21 Xinkui Zhao , Hengxuan Lou , Yifan Zhang , Junjie Dai , Shuiguang Deng , Jianwei Yin

Graph neural networks (GNNs) have emerged as the state of the art for a variety of graph-related tasks and have been widely used in Heterogeneous Graphs (HetGs), where meta-paths help encode specific semantics between various node types.…

Machine Learning · Computer Science 2025-02-25 Xuqi Mao , Zhenying He , X. Sean Wang

Graph Pattern Mining (GPM) is an important, rapidly evolving, and computation demanding area. GPM computation relies on subgraph enumeration, which consists in extracting subgraphs that match a given property from an input graph. Graphics…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-12-12 Samuel Ferraz , Vinicius Dias , Carlos H. C. Teixeira , George Teodoro , Wagner Meira