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Discrete models have a long tradition in engineering, including finite state machines, Boolean networks, Petri nets, and agent-based models. Of particular importance is the question of how the model structure constrains its dynamics. This…

Molecular Networks · Quantitative Biology 2011-08-02 Reinhard Laubenbacher , David Murrugarra , Alan Veliz-Cuba

Dynamical systems see widespread use in natural sciences like physics, biology, chemistry, as well as engineering disciplines such as circuit analysis, computational fluid dynamics, and control. For simple systems, the differential…

In this work, we are interested in structure learning for a set of spatially distributed dynamical systems, where individual subsystems are coupled via latent variables and observed through a filter. We represent this model as a directed…

Artificial Intelligence · Computer Science 2016-11-03 Oliver M. Cliff , Mikhail Prokopenko , Robert Fitch

We review theoretical approaches to the understanding of food webs. After an overview of the available food web data, we discuss three different classes of models. The first class comprise static models, which assign links between species…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 B. Drossel , A. J. McKane

In network science complex systems are represented as a mathematical graphs consisting of a set of nodes representing the components and a set of edges representing their interactions. The framework of networks has led to significant…

Physics and Society · Physics 2022-04-07 Alexandre Bovet , Hernán A. Makse

The work presented in this thesis concerns different aspects of dynamical processes on networks. The first subject considered is the theoretical modeling of exploration processes of complex networks, such as the ``traceroute'' process used…

Physics and Society · Physics 2007-05-23 Luca Dall'Asta

The structure of a network has a major effect on dynamical processes on that network. Many studies of the interplay between network structure and dynamics have focused on models of phenomena such as disease spread, opinion formation and…

Dynamical Systems · Mathematics 2025-10-21 Lucas Böttcher , Mason A. Porter

Many real-world scientific processes are governed by complex nonlinear dynamic systems that can be represented by differential equations. Recently, there has been increased interest in learning, or discovering, the forms of the equations…

Methodology · Statistics 2022-10-20 Joshua S. North , Christopher K. Wikle , Erin M. Schliep

Simple nonlinear dynamical systems with multiple stable stationary states are often taken as models for switchlike biological systems. This paper considers the interaction of multiple such simple multistable systems when they are embedded…

Quantitative Methods · Quantitative Biology 2008-04-10 Dennis Cates Wylie

Since many real world networks are evolving over time, such as social networks and user-item networks, there are increasing research efforts on dynamic network embedding in recent years. They learn node representations from a sequence of…

Social and Information Networks · Computer Science 2021-03-30 Guotong Xue , Ming Zhong , Jianxin Li , Jia Chen , Chengshuai Zhai , Ruochen Kong

We propose a model for network community detection using topological data analysis, a branch of modern data science that leverages theory from algebraic topology to statistical analysis and machine learning. Specifically, we use cellular…

Social and Information Networks · Computer Science 2023-10-10 Arne Wolf , Anthea Monod

Networks and graphs provide a simple but effective model to a vast set of systems which building blocks interact throughout pairwise interactions. Unfortunately, such models fail to describe all those systems which building blocks interact…

Physics and Society · Physics 2022-09-21 Mauro Faccin

Differential equations are a ubiquitous tool to study dynamics, ranging from physical systems to complex systems, where a large number of agents interact through a graph with non-trivial topological features. Data-driven approximations of…

Statistical Mechanics · Physics 2024-04-26 Vaiva Vasiliauskaite , Nino Antulov-Fantulin

The proliferation of data across the system lifecycle presents both a significant opportunity and a challenge for Engineering Design and Systems Engineering (EDSE). While this "digital thread" has the potential to drive innovation, the…

Software Engineering · Computer Science 2026-03-19 H. Sinan Bank , Daniel R. Herber

Although it is unambiguously agreed that structure plays a fundamental role in shaping the dynamics of complex systems, this intricate relationship still remains unclear. We investigate a general computational transformation by which we can…

Disordered Systems and Neural Networks · Physics 2015-05-13 Jie Zhang , Changsong Zhou , Xiaoke Xu , Michael Small

Services are flourishing drastically both on the Internet and in the real world. Additionally, services have become much more interconnected to facilitate transboundary business collaboration to create and deliver distinct new values to…

Computers and Society · Computer Science 2020-04-23 Mingyi Liu , Zhiying Tu , Xiaofei Xu , Zhongjie Wang

Dynamic programming is a mathematical optimization method and a computer programming method as well. In this paper, the notion of sheaf programming in topological spaces is introduced and it is demonstrated that it relates very well to the…

Optimization and Control · Mathematics 2020-10-26 Merve Nur Cakir , Mehwish Saleemi , Karl-Heinz Zimmermann

Dynamical systems theory has long provided a foundation for understanding evolving phenomena across scientific domains. Yet, the application of this theory to complex real-world systems remains challenging due to issues in mathematical…

Machine Learning · Computer Science 2024-11-05 Samuel A. Moore , Brian P. Mann , Boyuan Chen

Motivated by efforts to incorporate sheaves into networking, we seek to reinterpret pathfinding algorithms in terms of cellular sheaves, using Dijkstra's algorithm as an example. We construct sheaves on a graph with distinguished source and…

Networking and Internet Architecture · Computer Science 2020-12-14 Michael Moy , Robert Cardona , Robert Green , Jacob Cleveland , Alan Hylton , Robert Short

The complexity of many biological, social and technological systems stems from the richness of the interactions among their units. Over the past decades, a great variety of complex systems has been successfully described as networks whose…