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Chemellia is an open-source framework for atomistic machine learning in the Julia programming language. The framework takes advantage of Julia's high speed as well as the ability to share and reuse code and interfaces through the paradigm…

Computational Engineering, Finance, and Science · Computer Science 2023-05-23 Anant Thazhemadam , Dhairya Gandhi , Venkatasubramanian Viswanathan , Rachel C. Kurchin

Identifying quantum phase transitions poses a significant challenge in condensed matter physics, as this requires methods that both provide accurate results and scale well with system size. In this work, we demonstrate how relaxation…

Strongly Correlated Electrons · Physics 2026-02-11 David Jansen , Donato Farina , Luke Mortimer , Timothy Heightman , Andreas Leitherer , Pere Mujal , Jie Wang , Antonio Acín

Dynamical quantum phase transitions (DQPTs) are a class of non-equilibrium phase transitions that occur in many-body quantum systems during real-time evolution, rather than through parameter tuning as in conventional phase transitions. This…

Statistical Mechanics · Physics 2026-03-02 Manmeet Kaur , Somendra M. Bhattacharjee

The scattering problem can be implemented in a square-integrable basis via the so-called $J$-matrix method. While methods to compute the phase shift in the $J$-matrix approach are known, we introduce a novel formula in square-integrable…

Nuclear Theory · Physics 2024-12-16 Calvin W. Johnson , Bui Minh Loc , Austin Keller , Kenneth M. Nollett

High-fidelity flow simulations are indispensable when analyzing systems exhibiting multiphase flow phenomena. The accuracy of multiphase flow simulations is strongly contingent upon the finest mesh resolution used to represent the…

Computational Physics · Physics 2023-04-05 Kumar Saurabh , Masado Ishii , Makrand A. Khanwale , Hari Sundar , Baskar Ganapathysubramanian

We introduce a new strategy for coupling the parallel in time (parareal) iterative methodology with multiscale integrators. Following the parareal framework, the algorithm computes a low-cost approximation of all slow variables in the…

Numerical Analysis · Mathematics 2015-11-19 Gil Ariel , Seong Jun Kim , Richard Tsai

In problems of mathematical physics, to study the structures of spaces using the Cayley-Klein models in theoretical calculations, the use of generalized complex numbers is required. In the case of computational experiments, such tasks…

Mathematical Software · Computer Science 2020-07-21 Migran N. Gevorkyan , Anna V. Korolkova , Dmitry S. Kulyabov

We present a new algorithm for clustering points in R^n. The key property of the algorithm is that it is affine-invariant, i.e., it produces the same partition for any affine transformation of the input. It has strong guarantees when the…

Machine Learning · Computer Science 2008-08-04 S. Charles Brubaker , Santosh S. Vempala

State space models (SSMs) are a powerful and widely-used class of probabilistic models for analysing time-series data across various fields, from econometrics to robotics. Despite their prevalence, existing software frameworks for SSMs…

Computation · Statistics 2025-05-30 Tim Hargreaves , Qing Li , Charles Knipp , Frederic Wantiez , Simon J. Godsill , Hong Ge

We present an efficient approach for writing architecture-agnostic parallel high-performance stencil computations in Julia, which is instantiated in the package ParallelStencil.jl. Powerful metaprogramming, costless abstractions and…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-12-01 Samuel Omlin , Ludovic Räss

This paper presents a design framework for synthesizing angularly selective spatial filters using non-uniform metagratings. While traditional metagratings focus on channeling energy into higher-order Floquet modes for a fixed incidence…

Applied Physics · Physics 2026-01-29 Jinyong Kim , Minseok Kim

Sequential sampling models (SSMs) are a widely used framework describing decision-making as a stochastic, dynamic process of evidence accumulation. SSMs popularity across cognitive science has driven the development of various software…

Mathematical Software · Computer Science 2025-12-17 Kianté Fernandez , Dominique Makowski , Christopher Fisher

We introduce the third major version of Metatheory.jl, a Julia library for general-purpose metaprogramming and symbolic computation. Metatheory.jl provides a flexible and performant implementation of e-graphs and Equality Saturation (EqSat)…

Programming Languages · Computer Science 2024-06-04 Alessandro Cheli , Niklas Heim

Image collage is a very useful tool for visualizing an image collection. Most of the existing methods and commercial applications for generating image collages are designed on simple shapes, such as rectangular and circular layouts. This…

Computer Vision and Pattern Recognition · Computer Science 2024-01-08 Dong-Yi Wu , Thi-Ngoc-Hanh Le , Sheng-Yi Yao , Yun-Chen Lin , Tong-Yee Lee

Bi-clustering is a technique that allows for the simultaneous clustering of observations and features in a dataset. This technique is often used in bioinformatics, text mining, and time series analysis. An important advantage of…

Computation · Statistics 2023-02-09 Anastasiia Livochka , Ryan Browne , Sanjeena Subedi

N-body simulations and trajectory analysis rely on the calculation of attributes that depend on pairwise particle distances within a cutoff. Interparticle potential energies, forces, distribution functions, neighbor lists, and…

Computational Physics · Physics 2022-06-22 Leandro Martínez

Gradient-based inverse design in photonics has already achieved remarkable results in designing small-footprint, high-performance optical devices. The adjoint variable method, which allows for the efficient computation of gradients, has…

Motivation: Estimating model parameters from experimental observations is one of the key challenges in systems biology and can be computationally very expensive. While the Julia programming language was recently developed as a high-level…

Quantitative Methods · Quantitative Biology 2020-11-06 Paul F. Lang , Sungho Shin , Victor M. Zavala

We present a simple and effective method to eliminate system aberrations and speckle noise in quantitative phase imaging. Using spiral integration, complete information about system aberration is calculated from three laterally shifted…

Biological Physics · Physics 2018-02-14 Inhyeok Choi , Kyeoreh Lee , YongKeun Park

The development of new electronic structure methods is a very time consuming and error prone process when done by hand. SpinAdaptedSecondQuantization is an open-source Julia package we have developed for working with automated electronic…

Chemical Physics · Physics 2025-08-26 Marcus T. Lexander , Tor S. Haugland , Federico Rossi , Henrik Koch