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Many graph problems were first shown to be fixed-parameter tractable using the results of Robertson and Seymour on graph minors. We show that the combination of finite, computable, obstruction sets and efficient order tests is not just one…

Computational Complexity · Computer Science 2013-05-15 Michael R. Fellows , Bart M. P. Jansen

In the F-minor-free deletion problem we want to find a minimum vertex set in a given graph that intersects all minor models of graphs from the family F. The Vertex planarization problem is a special case of F-minor-free deletion for the…

Data Structures and Algorithms · Computer Science 2022-02-07 Bart M. P. Jansen , Michał Włodarczyk

We introduce a family of multilayer graph kernels and establish new links between graph convolutional neural networks and kernel methods. Our approach generalizes convolutional kernel networks to graph-structured data, by representing…

Machine Learning · Statistics 2020-06-30 Dexiong Chen , Laurent Jacob , Julien Mairal

We show that the k-Dominating Set problem is fixed parameter tractable (FPT) and has a polynomial kernel for any class of graphs that exclude K_{i,j} as a subgraph, for any fixed i, j >= 1. This strictly includes every class of graphs for…

Data Structures and Algorithms · Computer Science 2009-05-15 Geevarghese Philip , Venkatesh Raman , Somnath Sikdar

Inspired by a growing interest in analyzing network data, we study the problem of node classification on graphs, focusing on approaches based on kernel machines. Conventionally, kernel machines are linear classifiers in the implicit feature…

Machine Learning · Statistics 2010-01-25 Xiao Tang , Mu Zhu

Given a graph $G = (V, E)$ with $n$ vertices and $m$ edges, the DominatingSet problem asks for a set $D \subseteq V$ of minimal cardinality such that every vertex either is in $D$ or adjacent to a member of $D$. Although there is little…

Data Structures and Algorithms · Computer Science 2025-12-03 Lukas Geis , Alexander Leonhardt , Johannes Meintrup , Ulrich Meyer , Manuel Penschuck , Lukas Retschmeier

Maintaining a $k$-core decomposition quickly in a dynamic graph has important applications in network analysis. The main challenge for designing efficient exact algorithms is that a single update to the graph can cause significant global…

Data Structures and Algorithms · Computer Science 2023-09-28 Quanquan C. Liu , Jessica Shi , Shangdi Yu , Laxman Dhulipala , Julian Shun

Understanding spatial correlation is vital in many fields including epidemiology and social science. Lee, Meeks and Pettersson (Stat. Comput. 2021) recently demonstrated that improved inference for areal unit count data can be achieved by…

Data Structures and Algorithms · Computer Science 2026-02-10 Jessica Enright , Duncan Lee , Kitty Meeks , William Pettersson , John Sylvester

We study the kernelization complexity of structural parameterizations of the Vertex Cover problem. Here, the goal is to find a polynomial-time preprocessing algorithm that can reduce any instance $(G,k)$ of the Vertex Cover problem to an…

Data Structures and Algorithms · Computer Science 2023-07-25 Marin Bougeret , Bart M. P. Jansen , Ignasi Sau

The classic technique of Baker [J. ACM '94] is the most fundamental approach for designing approximation schemes on planar, or more generally topologically-constrained graphs, and it has been applied in a myriad of different variants and…

Data Structures and Algorithms · Computer Science 2023-11-01 Tuukka Korhonen , Wojciech Nadara , Michał Pilipczuk , Marek Sokołowski

We investigate preprocessing for vertex-subset problems on graphs. While the notion of kernelization, originating in parameterized complexity theory, is a formalization of provably effective preprocessing aimed at reducing the total…

Data Structures and Algorithms · Computer Science 2022-07-04 Benjamin Merlin Bumpus , Bart M. P. Jansen , Jari J. H. de Kroon

In the recent research of data mining, frequent structures in a sequence of graphs have been studied intensively, and one of the main concern is changing structures along a sequence of graphs that can capture dynamic properties of data. On…

Data Structures and Algorithms · Computer Science 2012-06-28 Takeaki Uno , Yushi Uno

Coresets have become an invaluable tool for solving $k$-means and kernel $k$-means clustering problems on large datasets with small numbers of clusters. On the other hand, spectral clustering works well on sparse graphs and has recently…

Machine Learning · Computer Science 2025-03-11 Ben Jourdan , Gregory Schwartzman , Peter Macgregor , He Sun

The Treewidth-2 Vertex Deletion problem asks whether a set of at most $t$ vertices can be removed from a graph, such that the resulting graph has treewidth at most two. A graph has treewidth at most two if and only if it does not contain a…

Data Structures and Algorithms · Computer Science 2022-03-21 Jeroen L. G. Schols

Inference of space-time varying signals on graphs emerges naturally in a plethora of network science related applications. A frequently encountered challenge pertains to reconstructing such dynamic processes, given their values over a…

Machine Learning · Computer Science 2018-09-25 Vassilis N. Ioannidis , Daniel Romero , Georgios B. Giannakis

A commonly used paradigm for representing graphs is to use a vector that contains normalized frequencies of occurrence of certain motifs or sub-graphs. This vector representation can be used in a variety of applications, such as, for…

Machine Learning · Computer Science 2014-03-05 Pinar Yanardag , S. V. N. Vishwanathan

Graph-based methods pervade the inference toolkits of numerous disciplines including sociology, biology, neuroscience, physics, chemistry, and engineering. A challenging problem encountered in this context pertains to determining the…

Machine Learning · Computer Science 2018-09-25 Daniel Romero , Vassilis N. Ioannidis , Georgios B. Giannakis

The technique of kernelization consists in extracting, from an instance of a problem, an essentially equivalent instance whose size is bounded in a parameter k. Besides being the basis for efficient param-eterized algorithms, this method…

Artificial Intelligence · Computer Science 2017-02-09 Clément Carbonnel , Emmanuel Hébrard

In this paper we consider kernelization for problems on d-degenerate graphs, i.e. graphs such that any subgraph contains a vertex of degree at most $d$. This graph class generalizes many classes of graphs for which effective kernelization…

Data Structures and Algorithms · Computer Science 2013-06-25 Marek Cygan , Fabrizio Grandoni , Danny Hermelin

Many machine learning techniques have been proposed in the last few years to process data represented in graph-structured form. Graphs can be used to model several scenarios, from molecules and materials to RNA secondary structures. Several…

Machine Learning · Computer Science 2018-11-19 Nicolò Navarin , Dinh V. Tran , Alessandro Sperduti