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High-quality scientific review and perspective papers require substantial time and effort, limiting researchers' ability to synthesize emerging knowledge. While Large Language Models (LLMs) leverage AI Scientists for scientific workflows,…

Artificial Intelligence · Computer Science 2026-03-03 Sasi Kiran Gaddipati , Farhana Keya , Gollam Rabby , Sören Auer

Artificial intelligence (AI) has acquired notorious relevance in modern computing as it effectively solves complex tasks traditionally done by humans. AI provides methods to represent and infer knowledge, efficiently manipulate texts and…

Information Retrieval · Computer Science 2024-01-23 José de la Torre-López , Aurora Ramírez , José Raúl Romero

Data-driven artificial intelligence models fed with published scientific findings have been used to create powerful prediction engines for scientific and technological advance, such as the discovery of novel materials with desired…

Artificial Intelligence · Computer Science 2021-04-13 Jamshid Sourati , James Evans

Modern plant science increasingly relies on large, heterogeneous datasets, but challenges in experimental design, data preprocessing, and reproducibility hinder research throughput. Here we introduce Aleks, an AI-powered multi-agent system…

Artificial Intelligence · Computer Science 2025-08-28 Daoyuan Jin , Nick Gunner , Niko Carvajal Janke , Shivranjani Baruah , Kaitlin M. Gold , Yu Jiang

Recent advances in large language models (LLMs) have fueled the vision of automated scientific discovery, often called AI Co-Scientists. To date, prior work casts these systems as generative co-authors responsible for crafting hypotheses,…

Computation and Language · Computer Science 2025-05-20 Guijin Son , Jiwoo Hong , Honglu Fan , Heejeong Nam , Hyunwoo Ko , Seungwon Lim , Jinyeop Song , Jinha Choi , Gonçalo Paulo , Youngjae Yu , Stella Biderman

Artificial intelligence research increasingly depends on prolonged cycles of reproduction, debugging, and iterative refinement to achieve State-Of-The-Art (SOTA) performance, creating a growing need for systems that can accelerate the full…

Systematic literature review is essential for evidence-based medicine, requiring comprehensive analysis of clinical trial publications. However, the application of artificial intelligence (AI) models for medical literature mining has been…

HIKMA Semi-Autonomous Conference is the first experiment in reimagining scholarly communication through an end-to-end integration of artificial intelligence into the academic publishing and presentation pipeline. This paper presents the…

Multiagent Systems · Computer Science 2025-10-27 Zain Ul Abideen Tariq , Mahmood Al-Zubaidi , Uzair Shah , Marco Agus , Mowafa Househ

Large language models (LLMs) achieve remarkable performance across numerous tasks by using a diverse array of adaptation strategies. However, optimally selecting a model and adaptation strategy under resource constraints is challenging and…

Machine Learning · Computer Science 2025-06-06 Jiayu Wang , Aws Albarghouthi , Frederic Sala

Large language models (LLMs) are increasingly used in scientific research and discovery, supporting tasks ranging from literature retrieval and synthesis to hypothesis generation, autonomous experimentation, and research evaluation.…

Digital Libraries · Computer Science 2026-05-13 Haoxuan Zhang , Ruochi Li , Yang Zhang , Ting Xiao , Jiangping Chen , Junhua Ding , Haihua Chen

The number of biomedical research articles published has doubled in the past 20 years. Search engine based systems naturally center around searching, but researchers may not have a clear goal in mind, or the goal may be expressed in a query…

Digital Libraries · Computer Science 2017-10-25 Jessica Perrie , Yanqi Hao , Zack Hayat , Recep Colak , Kelly Lyons , Shankar Vembu , Sam Molyneux

Biology is at the precipice of a new era where AI accelerates and amplifies the ability to study how cells operate, organize, and work as systems, revealing why disease happens and how to correct it. Organizations globally are prioritizing…

There is an increasing need in our society to achieve faster advances in Science to tackle urgent problems, such as climate changes, environmental hazards, sustainable energy systems, pandemics, among others. In certain domains like…

Large language models (LLMs) show remarkable potential in scientific hypothesis discovery. However, existing approaches face two critical limitations: they treat divergent exploratory ideation and convergent fine-grained refinement as…

Computation and Language · Computer Science 2026-05-29 Hongran An , Zonglin Yang

Scientific Machine Learning (SciML) integrates data-driven inference with physical modeling to solve complex problems in science and engineering. However, the design of SciML architectures, loss formulations, and training strategies remains…

Artificial Intelligence · Computer Science 2026-02-17 Qile Jiang , George Karniadakis

Recent advances in AI agents for software engineering and scientific discovery have demonstrated remarkable capabilities, yet their application to developing novel ranking models in commercial search engines remains unexplored. In this…

Information Retrieval · Computer Science 2026-03-25 Liwei Wu , Cho-Jui Hsieh

The complexity of modern bioinformatics analysis has created a critical gap between data generation and developing scientific insights. While large language models (LLMs) have shown promise in scientific reasoning, they remain fundamentally…

Artificial Intelligence · Computer Science 2025-10-01 Orion Li , Vinayak Agarwal , Summer Zhou , Ashwin Gopinath , Timothy Kassis

Recent advances in large language models have enabled the emergence of AI scientists that aim to autonomously analyze biological data and assist scientific discovery. Despite rapid progress, it remains unclear to what extent these systems…

Artificial Intelligence · Computer Science 2026-01-21 Erpai Luo , Jinmeng Jia , Yifan Xiong , Xiangyu Li , Xiaobo Guo , Baoqi Yu , Minsheng Hao , Lei Wei , Xuegong Zhang

A growing body of work pursues AI scientists capable of end-to-end autonomous scientific discovery. This position paper argues that although they already function as co-scientists, agentic AI scientists are not built for autonomous…

Artificial Intelligence · Computer Science 2026-05-12 Harshit Bisht , Vinay Kumar , Kevin Maik Jablonka , Mausam , N. M. Anoop Krishnan

Computational notebooks allow data scientists to express their ideas through a combination of code and documentation. However, data scientists often pay attention only to the code, and neglect creating or updating their documentation during…

Human-Computer Interaction · Computer Science 2022-08-19 April Yi Wang , Dakuo Wang , Jaimie Drozdal , Michael Muller , Soya Park , Justin D. Weisz , Xuye Liu , Lingfei Wu , Casey Dugan