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Given two graphs, the graph matching problem is to align the two vertex sets so as to minimize the number of adjacency disagreements between the two graphs. The seeded graph matching problem is the graph matching problem when we are first…

Graphs drawn in the plane are ubiquitous, arising from data sets through a variety of methods ranging from GIS analysis to image classification to shape analysis. A fundamental problem in this type of data is comparison: given a set of such…

Computational Geometry · Computer Science 2022-10-20 Levent Batakci , Abigail Branson , Bryan Castillo , Candace Todd , Erin Wolf Chambers , Elizabeth Munch

Networks are ubiquitous in the real world. Link prediction, as one of the key problems for network-structured data, aims to predict whether there exists a link between two nodes. The traditional approaches are based on the explicit…

Machine Learning · Computer Science 2021-06-01 Wei Wu , Bin Li , Chuan Luo , Wolfgang Nejdl

One of the major challenges in applications related to social networks, computational biology, collaboration networks etc., is to efficiently search for similar patterns in their underlying graphs. These graphs are typically noisy and…

Social and Information Networks · Computer Science 2015-12-17 Kanigalpula Samanvi , Naveen Sivadasan

Generation of graphs constrained by a specified graph edit distance from a source graph is important in applications such as cheminformatics, network anomaly synthesis, and structured data augmentation. Despite the growing demand for such…

Machine Learning · Computer Science 2026-04-08 Mamoona Ghafoor , Tatsuya Akutsu

In this paper we present an efficiently scaling quantum algorithm which finds the size of the maximum common edge subgraph for a pair of arbitrary graphs and thus provides a meaningful measure of graph similarity. The algorithm makes use of…

Quantum Physics · Physics 2018-10-04 M. Chiew , K. de Lacy , C. H. Yu , S. Marsh , J. B. Wang

Graph Crossing Number is a fundamental problem with various applications. In this problem, the goal is to draw an input graph $G$ in the plane so as to minimize the number of crossings between the images of its edges. Despite extensive…

Data Structures and Algorithms · Computer Science 2021-01-12 Julia Chuzhoy , Sepideh Mahabadi , Zihan Tan

The goal of graph inference is to design algorithms for learning properties of a hidden graph using queries to an oracle that returns information about the graph. Graph reconstruction, verification, and property testing are all types of…

Data Structures and Algorithms · Computer Science 2025-02-26 Huck Bennett , Mitchell Black , Amir Nayyeri , Evelyn Warton

The Smatch metric is a popular method for evaluating graph distances, as is necessary, for instance, to assess the performance of semantic graph parsing systems. However, we observe some issues in the metric that jeopardize meaningful…

Computation and Language · Computer Science 2025-10-17 Juri Opitz

Approximate Nearest Neighbor Search (ANNS) has become a fundamental component in many real-world applications. Among various ANNS algorithms, graph-based methods are state-of-the-art. However, ANNS often suffers from a significant drop in…

Databases · Computer Science 2025-10-28 Zhiyuan Hua , Qiji Mo , Zebin Yao , Lixiao Cui , Xiaoguang Liu , Gang Wang , Zijing Wei , Xinyu Liu , Tianxiao Tang , Shaozhi Liu , Lin Qu

The \textit{biharmonic distance} (BD) is a fundamental metric that measures the distance of two nodes in a graph. It has found applications in network coherence, machine learning, and computational graphics, among others. In spite of BD's…

Social and Information Networks · Computer Science 2024-08-27 Changan Liu , Ahad N. Zehmakan , Zhongzhi Zhang

Supervised learning on graphs is a challenging task due to the high dimensionality and inherent structural dependencies in the data, where each edge depends on a pair of vertices. Existing conventional methods are designed for standard…

Methodology · Statistics 2024-06-27 Cencheng Shen , Shangsi Wang , Alexandra Badea , Carey E. Priebe , Joshua T. Vogelstein

Graph embedding provides an efficient solution for graph analysis by converting the graph into a low-dimensional space which preserves the structure information. In contrast to the graph structure data, the i.i.d. node embedding can be…

Machine Learning · Computer Science 2017-05-16 Hongyun Cai , Vincent W. Zheng , Kevin Chen-Chuan Chang

The distance of a graph from being triangle-free is a fundamental graph parameter, counting the number of edges that need to be removed from a graph in order for it to become triangle-free. Its corresponding computational problem is the…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-22 Keren Censor-Hillel , Majd Khoury

Graph generation is a crucial task in many fields, including network science and bioinformatics, as it enables the creation of synthetic graphs that mimic the properties of real-world networks for various applications. Graph Generative…

Machine Learning · Computer Science 2026-01-21 Salvatore Romano , Marco Grassia , Giuseppe Mangioni

Graph coarsening is a technique for solving large-scale graph problems by working on a smaller version of the original graph, and possibly interpolating the results back to the original graph. It has a long history in scientific computing…

Machine Learning · Computer Science 2023-06-16 Yifan Chen , Rentian Yao , Yun Yang , Jie Chen

Metric data plays an important role in various settings such as metric-based indexing, clustering, classification, and approximation algorithms in general. Due to measurement error, noise, or an inability to completely gather all the data,…

Computational Geometry · Computer Science 2018-07-24 Chenglin Fan , Benjamin Raichel , Gregory Van Buskirk

Graph-based approaches are empirically shown to be very successful for the nearest neighbor search (NNS). However, there has been very little research on their theoretical guarantees. We fill this gap and rigorously analyze the performance…

Data Structures and Algorithms · Computer Science 2020-08-21 Liudmila Prokhorenkova , Aleksandr Shekhovtsov

The notion of local intrinsic dimensionality (LID) is an important advancement in data dimensionality analysis, with applications in data mining, machine learning and similarity search problems. Existing distance-based LID estimators were…

Machine Learning · Computer Science 2023-07-14 Miloš Savić , Vladimir Kurbalija , Miloš Radovanović

Graph embeddings have emerged as a powerful tool for representing complex network structures in a low-dimensional space, enabling the use of efficient methods that employ the metric structure in the embedding space as a proxy for the…

Social and Information Networks · Computer Science 2024-04-18 Radosław Nowak , Adam Małkowski , Daniel Cieślak , Piotr Sokół , Paweł Wawrzyński