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Inspired by how the shape deformations in active organisms help them to migrate through disordered porous environments, we simulate active ring polymers in two-dimensional random porous media. Flexible and inextensible active ring polymers…

Soft Condensed Matter · Physics 2022-08-16 Ligesh Theeyancheri , Subhasish Chaki , Tapomoy Bhattacharjee , Rajarshi Chakrabarti

The need for structuring on micrometer scales is abundant, for example, in view of phononic applications. We here outline a novel approach based on the phenomenon of active turbulence on the mesoscale. As we demonstrate, a shear-thickening…

Soft Condensed Matter · Physics 2024-04-02 Henning Reinken , Andreas M. Menzel

Several meters below the coastal ocean surface there are areas of high ecological activity that contain thin layers of concentrated motile phytoplankton. Gyrotactic trapping has been proposed as a potential mechanism for layer formation of…

Fluid Dynamics · Physics 2019-05-22 Smitha Maretvadakethope , Eric E. Keaveny , Yongyun Hwang

Active systems, from bacterial suspensions to cellular monolayers, are continuously driven out of equilibrium by local injection of energy from their constituent elements and exhibit turbulent-like and chaotic patterns. Here we demonstrate…

Soft Condensed Matter · Physics 2016-02-04 Amin Doostmohammadi , Michael F. Adamer , Sumesh P. Thampi , Julia M. Yeomans

The long-time behavior of transport coefficients in a model for spatially heterogeneous media in two and three dimensions is investigated by Molecular Dynamics simulations. The behavior of the velocity auto-correlation function is…

Soft Condensed Matter · Physics 2007-05-23 Felix Höfling , Thomas Franosch

Microorganisms are rarely found in Nature swimming freely in an unbounded fluid. Instead, they typically encounter other organisms, hard walls, or deformable boundaries such as free interfaces or membranes. Hydrodynamic interactions between…

Fluid Dynamics · Physics 2013-10-21 Marcelo A. Dias , Thomas R. Powers

We study the characteristics of fluid-fluid displacement in simple mixed-wet porous micromodels numerically using a dynamic pore network model. The porous micromodel consists of distinct water-wet and oil-wet regions, whose fractions are…

Soft Condensed Matter · Physics 2023-08-02 Ashkan Irannezhad , Bauyrzhan K. Primkulov , Ruben Juanes , Benzhong Zhao

Collective transport through channels shows surprising properties under one-dimensional confinement: particles in a single file exhibit sub-diffusive behavior, while liquid confinement causes distance-independent correlations between the…

Soft Condensed Matter · Physics 2019-06-05 Karolis Misiunas , Ulrich F. Keyser

Heterogeneous media constitute random disordered environments where transport is drastically hindered. Employing extensive molecular dynamics simulations, we investigate the spatio-temporal dynamics of tracer particles in the Lorentz model…

Statistical Mechanics · Physics 2013-02-14 Markus Spanner , Simon K. Schnyder , Felix Höfling , Thomas Voigtmann , Thomas Franosch

The transport of bio-particles in viscous flows exhibits a rich variety of dynamical behaviour, such as morphological transitions, complex orientation dynamics or deformations. Characterising such complex behaviour under well controlled…

Diverse processes--e.g. bioremediation, biofertilization, and microbial drug delivery--rely on bacterial migration in disordered, three-dimensional (3D) porous media. However, how pore-scale confinement alters bacterial motility is unknown…

Soft Condensed Matter · Physics 2019-05-09 Tapomoy Bhattacharjee , Sujit S. Datta

The complex formations exhibited by schooling fish have long been the object of fascination for biologists and physicists. However, the physical and sensory mechanisms leading to organized collective behavior remain elusive. On the physical…

Fluid Dynamics · Physics 2025-07-09 Anand U. Oza , Eva Kanso , Michael J. Shelley

Many fascinating properties of biological active matter crucially depend on the capacity of constituting entities to perform directed motion, e.g., molecular motors transporting vesicles inside cells or bacteria searching for food. While…

Statistical Mechanics · Physics 2023-06-21 Pietro Luigi Muzzeddu , Édgar Roldán , Andrea Gambassi , Abhinav Sharma

We extensively study the Toner-Tu-Swift-Hohenberg model of motile active matter by means of direct numerical simulations in a two-dimensional confined domain. By exploring the space of parameters of the model we investigate the emergence of…

Fluid Dynamics · Physics 2023-06-02 Leonardo Puggioni , Guido Boffetta , Stefano Musacchio

Micro-robots for, e.g., biomedical applications, need to be equipped with motility strategies that enable them to navigate through complex environments. Inspired by biological microorganisms we recreate motility patterns such as…

Soft Condensed Matter · Physics 2023-11-13 Christoph Lohrmann , Christian Holm

Stimuli-responsive materials that modify their shape in response to changes in environmental conditions -- such as solute concentration, temperature, pH, and stress -- are widespread in nature and technology. Applications include micro- and…

Fluid Dynamics · Physics 2017-07-05 Lefteris I. Kosmidis , Kaare H. Jensen

Understanding the nature of traffic heterogeneity is of major importance, given the widespread adoption of micromobility in cities. Based on massive field data and a nonequilibrium model, we demonstrate that heterogeneous, multispecies…

Applied Physics · Physics 2025-01-07 Georg Anagnostopoulos , Nikolas Geroliminis

Complex or hostile environments can sometimes inhibit the movement capabilities of diffusive particles or active swimmers, who may thus become stuck in fixed positions. This occurs, for example, in the adhesion of bacteria to surfaces at…

Statistical Mechanics · Physics 2024-01-12 Luca Angelani

Many biological fluids are composed of suspended polymers immersed in a viscous fluid. A prime example is mucus, where the polymers are also known to form a network. While the presence of this microstructure is linked with an overall…

Fluid Dynamics · Physics 2024-10-10 Adam K. Townsend , Eric E. Keaveny

Vortex rings are critical for thrust production underwater. In the ocean, self-propelled mesozooplankton generate vortices while swimming within a weakly stratified fluid. While large-scale biogenic transport has been observed during…

Fluid Dynamics · Physics 2023-04-12 Yunxing Su , Monica M. Wilhelmus , Roberto Zenit