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A topological index of a graph $G$ is a numerical quantity that describes its topology. Reverse degree-based topological indices play an important role in finding topological descriptors. Azacitidine, Decitabine, and Guadecitabine are…

Biomolecules · Quantitative Biology 2024-04-01 H. M. Nagesh

Chemical graphs are simple undirected connected graphs, where vertices represent atoms in a molecule and edges represent chemical bonds. A degree-based topological index is a molecular descriptor used to study specific physicochemical…

Introduction: molecular geometry, the three-dimensional arrangement of atoms within a molecule, is fundamental to understanding chemical reactivity, physical properties, and biological activity. The prevailing models used to describe…

General Physics · Physics 2026-05-12 Sebastian Ali Sacasa-Cespedes

We apply some basic notions from combinatorial topology to establish various algebraic properties of edge ideals of graphs and more general Stanley-Reisner rings. In this way we provide new short proofs of some theorems from the literature…

Combinatorics · Mathematics 2008-10-23 Anton Dochtermann , Alexander Engstrom

A common starting point for drug design is to find small chemical groups or "fragments" that form interactions with distinct subregions in a protein binding pocket. The subsequent challenge is to assemble these fragments into a molecule…

Quantitative Methods · Quantitative Biology 2025-05-29 Rohan V. Koodli , Alexander S. Powers , Ayush Pandit , Chiho Im , Ron O. Dror

A (molecular) graph in which all vertices have the same degree is known as a regular graph. According to Gutman, Hansen, and M\'elot [J. Chem. Inf. Model. 45 (2005) 222-230], it is of interest to measure the irregularity of nonregular…

Combinatorics · Mathematics 2025-01-06 Akbar Ali , Darko Dimitrov , Tamás Réti , Abeer M. Albalahi , Amjad E. Hamza

Topological indices are molecular descriptors that describe the properties of chemical compounds. These topological indices correlate specific physico-chemical properties like boiling point, enthalpy of vaporization, strain energy, and…

Combinatorics · Mathematics 2022-10-05 Haritha T , Chithra A. V.

The association between tie strength and social structure is a fundamental topic in the social sciences. We study this association by analyzing tie strength in higher-order networks, an increasingly relevant model which can encode group…

Social and Information Networks · Computer Science 2024-09-26 Arnab Sarker , Jean-Baptiste Seby , Austin R. Benson , Ali Jadbabaie

We present a method based on graph theory for evaluation of the inelastic propensity rules for molecules exhibiting complete destructive quantum interference in their elastic transmission. The method uses an extended adjacency matrix…

Mesoscale and Nanoscale Physics · Physics 2017-05-11 Rudolf Sýkora , Tomáš Novotný

Topological indices are graph-theoretic descriptors that play a crucial role in mathematical chemistry, capturing the structural characteristics of molecules and enabling the prediction of their physicochemical properties. A widely studied…

Discrete Mathematics · Computer Science 2025-11-26 Sébastien Bonte , Gauvain Devillez , Valentin Dusollier , Alain Hertz , Hadrien Mélot , David Schindl

Enumerating chemical graphs satisfying given constraints is a fundamental problem in mathematical and computational chemistry, and plays an essential part in a recently proposed framework for the inverse QSAR/QSPR. In this paper,…

Data Structures and Algorithms · Computer Science 2020-04-21 Kyousuke Yamashita , Ryuji Masui , Xiang Zhou , Chenxi Wang , Aleksandar Shurbevski , Hiroshi Nagamochi , Tatsuya Akutsu

Measuring similarity between complex objects is a fundamental task in many scientific fields. When objects are represented as graphs, graph similarity/distance measures offer a powerful framework for quantifying structural resemblance.…

Combinatorics · Mathematics 2025-09-30 Matthias Dehmer , Izudin Redžepović , Niko Tratnik , Petra Žigert Pleteršek

Carbon nanotube Y-junctions are of great interest to the next generation of innovative multi-terminal nanodevices. Topological indices are graph-theoretically based parameters that describe various structural properties of a chemical…

Mesoscale and Nanoscale Physics · Physics 2023-01-06 Sohan Lal , Vijay Kumar Bhat , Sahil Sharma

Structural disorder can improve the optical properties of metasurfaces, whether it is emerging from some large-scale fabrication methods, or explicitly designed and built lithographically. Correlated disorder, induced by a minimum…

We obtain several sharp spectral bounds, approximations, and exact values for the isoperimetric number and related edge-expansion parameters of graphs. Our results focus on graph powers and on families of graphs with rich algebraic or…

Uncovering anomalies in attributed networks has recently gained popularity due to its importance in unveiling outliers and flagging adversarial behavior in a gamut of data and network science applications including {the Internet of Things…

Social and Information Networks · Computer Science 2021-04-20 Konstantinos D. Polyzos , Costas Mavromatis , Vassilis N. Ioannidis , Georgios B. Giannakis

The paper discusses the edge hyper-Zagreb index of a graph, which is calculated by replacing vertex degrees with edge degrees. The degree of an edge is determined by adding up the degrees of the end vertices of the edge and subtracting 2.…

General Mathematics · Mathematics 2024-06-26 Z. Aliannejadi , S. Shafiee Alamoti

Graph-level representations are crucial tools for characterising structural differences between graphs. However, comparing graphs with different cardinalities, even when sampled from the same underlying distribution, remains challenging.…

Machine Learning · Computer Science 2026-05-08 Katharina Limbeck , Nadja Häusermann , Martin Carrasco , Guy Wolf , Bastian Rieck

We study strength of inequalities used in mixed-integer programming, and in branch-and-cut algorithms that solve such problems. Strength is an ethereal property lacking good formal definition, but crucial for computational speed. We review…

Optimization and Control · Mathematics 2025-07-09 David M. Warme

We determine the optimum topology of quasi-one dimensional nonlinear optical structures using generalized quantum graph models. Quantum graphs are relational graphs endowed with a metric and a multiparticle Hamiltonian acting on the edges,…

Quantum Physics · Physics 2015-06-19 Rick Lytel , Shoresh Shafei , Mark G. Kuzyk