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Biodiversity monitoring is crucial for tracking and counteracting adverse trends in population fluctuations. However, automatic recognition systems are rarely applied so far, and experts evaluate the generated data masses manually.…
Automated identification of insects is a tough task where many challenges like data limitation, imbalanced data count, and background noise needs to be overcome for better performance. This paper describes such an image dataset which…
Monitoring the number of insect pests is a crucial component in pheromone-based pest management systems. In this paper, we propose an automatic detection pipeline based on deep learning for identifying and counting pests in images taken…
Climate change and other anthropogenic factors have led to a catastrophic decline in insects, endangering both biodiversity and the ecosystem services on which human society depends. Data on insect abundance, however, remains woefully…
Ground beetles are a highly sensitive and speciose biological indicator, making them vital for monitoring biodiversity. However, they are currently an underutilized resource due to the manual effort required by taxonomic experts to perform…
Biologists all over the world use camera traps to monitor biodiversity and wildlife population density. The computer vision community has been making strides towards automating the species classification challenge in camera traps, but it…
Insect pests recognition is necessary for crop protection in many areas of the world. In this paper we propose an automatic classifier based on the fusion between saliency methods and convolutional neural networks. Saliency methods are…
In the field of transmission electron microscopy, data interpretation often lags behind acquisition methods, as image processing methods often have to be manually tailored to individual datasets. Machine learning offers a promising approach…
Deep learning-based segmentation and classification are crucial to large-scale biomedical imaging, particularly for 3D data, where manual analysis is impractical. Although many methods exist, selecting suitable models and tuning parameters…
Insects as pollinators play a crucial role in ecosystem management and world food production. However, insect populations are declining, calling for efficient methods of insect monitoring. Existing methods analyze video or time-lapse images…
State-of-the-art image segmentation algorithms generally consist of at least two successive and distinct computations: a boundary detection process that uses local image information to classify image locations as boundaries between objects,…
Automated segmentation tools often encounter accuracy and adaptability issues when applied to images of different pathology. The purpose of this study is to explore the feasibility of building a workflow to efficiently route images to…
Insects are an integral part of our ecosystem. These often small and evasive animals have a big impact on their surroundings, providing a large part of the present biodiversity and pollination duties, forming the foundation of the food…
Birds are important indicators for monitoring both biodiversity and habitat health; they also play a crucial role in ecosystem management. Decline in bird populations can result in reduced eco-system services, including seed dispersal,…
Automated recognition and classification of bacteria species from microscopic images have significant importance in clinical microbiology. Bacteria classification is usually carried out manually by biologists using different shapes and…
Automatic recognition of insect sound could help us understand changing biodiversity trends around the world -- but insect sounds are challenging to recognize even for deep learning. We present a new dataset comprised of 26399 audio files,…
Insect-pests significantly impact global agricultural productivity and quality. Effective management involves identifying the full insect community, including beneficial insects and harmful pests, to develop and implement integrated pest…
The tracing of neural pathways through large volumes of image data is an incredibly tedious and time-consuming process that significantly encumbers progress in neuroscience. We are exploring deep learning's potential to automate…
Many recent medical segmentation systems rely on powerful deep learning models to solve highly specific tasks. To maximize performance, it is standard practice to evaluate numerous pipelines with varying model topologies, optimization…
Complex image processing and computer vision systems often consist of a processing pipeline of functional modules. We intend to replace parts or all of a target pipeline with deep neural networks to achieve benefits such as increased…