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In many application domains, it is important to characterize how complex learned models make their decisions across the distribution of instances. One way to do this is to identify the features and interactions among them that contribute to…

Machine Learning · Computer Science 2018-11-22 Kyubin Lee , Akshay Sood , Mark Craven

Navigating the complex landscape of single-cell transcriptomic data presents significant challenges. Central to this challenge is the identification of a meaningful representation of high-dimensional gene expression patterns that sheds…

Quantitative Methods · Quantitative Biology 2023-12-13 Mu Qiao

Biological data including gene expression data are generally high-dimensional and require efficient, generalizable, and scalable machine-learning methods to discover their complex nonlinear patterns. The recent advances in machine learning…

Machine Learning · Computer Science 2020-12-21 Dinesh Singh , Héctor Climente-González , Mathis Petrovich , Eiryo Kawakami , Makoto Yamada

Machine learning models, such as neural networks, decision trees, random forests, and gradient boosting machines, accept a feature vector, and provide a prediction. These models learn in a supervised fashion where we provide feature vectors…

Machine Learning · Computer Science 2020-11-03 Jeff Heaton

A neural network with fixed topology can be regarded as a parametrization of functions, which decides on the correlations between functional variations when parameters are adapted. We propose an analysis, based on a differential geometry…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Marc Toussaint

One main obstacle for the wide use of deep learning in medical and engineering sciences is its interpretability. While neural network models are strong tools for making predictions, they often provide little information about which features…

Machine Learning · Statistics 2021-12-06 Vu Dinh , Lam Si Tung Ho

Deep neural networks (DNNs) are increasingly being deployed in safety-critical systems such as personal healthcare devices and self-driving cars. In such DNN-based systems, error resilience is a top priority since faults in DNN inference…

Machine Learning · Computer Science 2021-12-28 Behnam Ghavami , Mani Sadati , Zhenman Fang , Lesley Shannon

Graph neural networks have emerged as a promising approach for the analysis of non-Euclidean data such as meshes. In medical imaging, mesh-like data plays an important role for modelling anatomical structures, and shape classification can…

Computer Vision and Pattern Recognition · Computer Science 2022-11-01 Nairouz Shehata , Wulfie Bain , Ben Glocker

Graph neural networks (GNNs) have achieved extraordinary enhancements in various areas including the fields medical imaging and network neuroscience where they displayed a high accuracy in diagnosing challenging neurological disorders such…

Machine Learning · Computer Science 2022-09-14 Mehmet Yigit Balik , Arwa Rekik , Islem Rekik

Neural algorithmic reasoning is an emerging research direction that endows neural networks with the ability to mimic algorithmic executions step-by-step. A common paradigm in existing designs involves the use of historical embeddings in…

Machine Learning · Computer Science 2024-03-11 Montgomery Bohde , Meng Liu , Alexandra Saxton , Shuiwang Ji

Genetic Algorithms (GAs) are used to solve search and optimization problems in which an optimal solution can be found using an iterative process with probabilistic and non-deterministic transitions. However, depending on the problem's…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-01-23 Matheus F. Torquato , Marcelo A. C. Fernandes

Modern computer systems store vast amounts of personal data, enabling advances in AI and ML but risking user privacy and trust. For privacy reasons, it is sometimes desired for an ML model to forget part of the data it was trained on. In…

Machine Learning · Computer Science 2025-12-30 Amartya Hatua , Trung T. Nguyen , Filip Cano , Andrew H. Sung

When trained as generative models, Deep Learning algorithms have shown exceptional performance on tasks involving high dimensional data such as image denoising and super-resolution. In an increasingly connected world dominated by mobile and…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-10 Ian Colbert , Jake Daly , Ken Kreutz-Delgado , Srinjoy Das

Link prediction is crucial for understanding complex networks but traditional Graph Neural Networks (GNNs) often rely on random negative sampling, leading to suboptimal performance. This paper introduces Fuzzy Graph Attention Networks…

Machine Learning · Computer Science 2025-02-04 Jinming Xing , Ruilin Xing , Chang Xue , Dongwen Luo

The interpretability of deep learning models has raised extended attention these years. It will be beneficial if we can learn an interpretable structure from deep learning models. In this paper, we focus on Recurrent Neural Networks~(RNNs)…

Neural and Evolutionary Computing · Computer Science 2020-01-15 Bo-Jian Hou , Zhi-Hua Zhou

Functional groups (FGs) are molecular substructures that are served as a foundation for analyzing and predicting chemical properties of molecules. Automatic discovery of FGs will impact various fields of research, including medicinal…

Machine Learning · Computer Science 2019-10-11 Phillip Pope , Soheil Kolouri , Mohammad Rostrami , Charles Martin , Heiko Hoffmann

It is desirable for statistical models to detect signals of interest independently of their position. If the data is generated by some smooth process, this additional structure should be taken into account. We introduce a new class of…

Machine Learning · Computer Science 2023-08-11 Florian Heinrichs , Mavin Heim , Corinna Weber

Neuroevolution is a powerful method of applying an evolutionary algorithm to refine the performance of artificial neural networks through natural selection; however, the fitness evaluation of these networks can be time-consuming and…

Neural and Evolutionary Computing · Computer Science 2024-04-18 Derek Whitley

Few-shot instance segmentation (FSIS) conjoins the few-shot learning paradigm with general instance segmentation, which provides a possible way of tackling instance segmentation in the lack of abundant labeled data for training. This paper…

Computer Vision and Pattern Recognition · Computer Science 2020-04-01 Zhibo Fan , Jin-Gang Yu , Zhihao Liang , Jiarong Ou , Changxin Gao , Gui-Song Xia , Yuanqing Li

In recent years, deep perceptual loss has been widely and successfully used to train machine learning models for many computer vision tasks, including image synthesis, segmentation, and autoencoding. Deep perceptual loss is a type of loss…

Computer Vision and Pattern Recognition · Computer Science 2024-07-04 Gustav Grund Pihlgren , Konstantina Nikolaidou , Prakash Chandra Chhipa , Nosheen Abid , Rajkumar Saini , Fredrik Sandin , Marcus Liwicki