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A fundamental challenge in causal inference with observational data is correct specification of a causal model. When there is model uncertainty, analysts may seek to use estimates from multiple candidate models that rely on distinct, and…

Methodology · Statistics 2026-03-03 Rohit Bhattacharya , Ina Ocelli , Ted Westling

Fueled by breakthrough technology developments, the biological, biomedical, and behavioral sciences are now collecting more data than ever before. There is a critical need for time- and cost-efficient strategies to analyze and interpret…

Fault-tolerant deep learning accelerator is the basis for highly reliable deep learning processing and critical to deploy deep learning in safety-critical applications such as avionics and robotics. Since deep learning is known to be…

Hardware Architecture · Computer Science 2023-12-22 Qing Zhang , Cheng Liu , Bo Liu , Haitong Huang , Ying Wang , Huawei Li , Xiaowei Li

Agentic AI scientists equipped with domain-specific tools are rapidly entering scientific workflows across disciplines, with especially strong uptake in the life sciences where they can be used for literature synthesis, sequence analysis,…

Other Quantitative Biology · Quantitative Biology 2026-05-05 Kimon Antonios Provatas , Avery Self , Ioannis Mouratidis , Ilias Georgakopoulos-Soares

Hierarchical decision problems are often modeled as bilevel programs in which a leader commits to a policy and a follower responds optimally. When the follower's optimal response is nonunique, or when only near-optimal follower behavior can…

Optimization and Control · Mathematics 2026-05-19 Jiguang Yu

Biological foundation models (BioFMs), pretrained on large-scale biological sequences, have recently shown strong potential in providing meaningful representations for diverse downstream bioinformatics tasks. However, such models often rely…

Machine Learning · Computer Science 2026-02-10 Yifan Wu , Jiyue Jiang , Xichen Ye , Yiqi Wang , Chang Zhou , Yitao Xu , Jiayang Chen , He Hu , Weizhong Zhang , Cheng Jin , Jiao Yuan , Yu Li

Backdoor attacks pose a serious security threat for training neural networks as they surreptitiously introduce hidden functionalities into a model. Such backdoors remain silent during inference on clean inputs, evading detection due to…

Cryptography and Security · Computer Science 2023-12-15 Lukas Struppek , Martin B. Hentschel , Clifton Poth , Dominik Hintersdorf , Kristian Kersting

Dose-finding trials for oncology studies are traditionally designed to assess safety in the early stages of drug development. With the rise of molecularly targeted therapies and immuno-oncology compounds, biomarker-driven approaches have…

Methodology · Statistics 2025-09-15 Xijin Chen , Pavel Mozgunov , Richard D. Baird , Thomas Jaki

The vulnerability of machine learning models to adversarial attacks remains a critical security challenge. Traditional defenses, such as adversarial training, typically robustify models by minimizing a worst-case loss. However, these…

Machine Learning · Statistics 2025-10-13 Pablo G. Arce , Roi Naveiro , David Ríos Insua

Foundation models are powerful technologies: how they are released publicly directly shapes their societal impact. In this position paper, we focus on open foundation models, defined here as those with broadly available model weights (e.g.…

We survey applications of pretrained foundation models in robotics. Traditional deep learning models in robotics are trained on small datasets tailored for specific tasks, which limits their adaptability across diverse applications. In…

Foundation vision or vision-language models are trained on large unlabeled or noisy data and learn robust representations that can achieve impressive zero- or few-shot performance on diverse tasks. Given these properties, they are a natural…

Computer Vision and Pattern Recognition · Computer Science 2024-06-26 Sanket Rajan Gupte , Josiah Aklilu , Jeffrey J. Nirschl , Serena Yeung-Levy

Probabilistic models analyze data by relying on a set of assumptions. Data that exhibit deviations from these assumptions can undermine inference and prediction quality. Robust models offer protection against mismatch between a model's…

Machine Learning · Statistics 2018-06-20 Yixin Wang , Alp Kucukelbir , David M. Blei

Human vision models are at the core of image processing. For instance, classical approaches to the problem of image quality are based on models that include knowledge about human vision. However, nowadays, deep learning approaches have…

Computer Vision and Pattern Recognition · Computer Science 2025-05-20 Jorge Vila-Tomás , Pablo Hernández-Cámara , Valero Laparra , Jesús Malo

Training data is an essential input into creating competent artificial intelligence (AI) models. AI models for biology are trained on large volumes of data, including data related to biological sequences, structures, images, and functions.…

Deep learning models for survival analysis have gained significant attention in the literature, but they suffer from severe performance deficits when the dataset contains many irrelevant features. We give empirical evidence for this problem…

Machine Learning · Computer Science 2019-03-08 Carl Rietschel , Jinsung Yoon , Mihaela van der Schaar

The ability to accurately estimate risk of developing breast cancer would be invaluable for clinical decision-making. One promising new approach is to integrate image-based risk models based on deep neural networks. However, one must take…

Image and Video Processing · Electrical Eng. & Systems 2020-09-17 Yue Liu , Hossein Azizpour , Fredrik Strand , Kevin Smith

The challenge in the widely applicable online matching problem lies in making irrevocable assignments while there is uncertainty about future inputs. Most theoretically-grounded policies are myopic or greedy in nature. In real-world…

Machine Learning · Computer Science 2022-11-01 Mohammad Ali Alomrani , Reza Moravej , Elias B. Khalil

Survival analysis is a fundamental tool for modeling time-to-event data in healthcare, engineering, and finance, where censored observations pose significant challenges. While traditional methods like the Beran estimator offer nonparametric…

Machine Learning · Computer Science 2025-06-13 Andrei V. Konstantinov , Vlada A. Efremenko , Lev V. Utkin

Recent analysis of deep neural networks has revealed their vulnerability to carefully structured adversarial examples. Many effective algorithms exist to craft these adversarial examples, but performant defenses seem to be far away. In this…

Computer Vision and Pattern Recognition · Computer Science 2018-10-09 Neale Ratzlaff , Li Fuxin