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Interpreting a node-link graph is enhanced if similar subgraphs (or motifs) are depicted in a similar manner; that is, they have the same visual form. Small motifs within graphs may be perceived to be identical when they are structurally…

Human-Computer Interaction · Computer Science 2023-08-11 Jacob Miller , Mohammad Ghoniem , Hsiang-Yun Wu , Helen C. Purchase

Graph-based analyses have gained a lot of relevance in the past years due to their high potential in describing complex systems by detailing the actors involved, their relations and their behaviours. Nevertheless, in scenarios where these…

Machine Learning · Computer Science 2021-06-11 Francesco Zola , Lander Segurola , Jan Lukas Bruse , Mikel Galar Idoate

A graph neural network transforms features in each vertex's neighborhood into a vector representation of the vertex. Afterward, each vertex's representation is used independently for predicting its label. This standard pipeline implicitly…

Machine Learning · Computer Science 2020-06-18 Junteng Jia , Austin R. Benson

The human brain undergoes dynamic, potentially pathology-driven, structural changes throughout a lifespan. Longitudinal Magnetic Resonance Imaging (MRI) and other neuroimaging data are valuable for characterizing trajectories of change…

Computer Vision and Pattern Recognition · Computer Science 2025-10-14 Agampreet Aulakh , Nils D. Forkert , Matthias Wilms

Learning efficient graph representation is the key to favorably addressing downstream tasks on graphs, such as node or graph property prediction. Given the non-Euclidean structural property of graphs, preserving the original graph data's…

Machine Learning · Computer Science 2022-05-31 Bingxin Zhou , Xuebin Zheng , Yu Guang Wang , Ming Li , Junbin Gao

We present a model for capturing musical features and creating novel sequences of music, called the Convolutional Variational Recurrent Neural Network. To generate sequential data, the model uses an encoder-decoder architecture with latent…

Sound · Computer Science 2018-10-09 Eunjeong Stella Koh , Shlomo Dubnov , Dustin Wright

Large language models (LLMs) have demonstrated promising capabilities in Text-Attributed Graph (TAG) understanding. Recent studies typically focus on verbalizing the graph structures via handcrafted prompts, feeding the target node and its…

Artificial Intelligence · Computer Science 2026-01-21 Zijun Di , Bin Lu , Huquan Kang , Luoyi Fu , Jiaxin Ding , Xiaoying Gan , Lei Zhou , Xinbing Wang , Chenghu Zhou

We present IsalGraph, a method for representing the structure of any finite, simple graph as a compact string over a nine-character instruction alphabet. The encoding is executed by a small virtual machine comprising a sparse graph, a…

Computation and Language · Computer Science 2026-03-12 Ezequiel Lopez-Rubio , Mario Pascual-Gonzalez

Learning to infer graph representations and performing spatial reasoning in a complex surgical environment can play a vital role in surgical scene understanding in robotic surgery. For this purpose, we develop an approach to generate the…

Computer Vision and Pattern Recognition · Computer Science 2020-09-14 Mobarakol Islam , Lalithkumar Seenivasan , Lim Chwee Ming , Hongliang Ren

Electronic medical record (EMR) data contains historical sequences of visits of patients, and each visit contains rich information, such as patient demographics, hospital utilisation and medical codes, including diagnosis, procedure and…

Machine Learning · Computer Science 2020-07-24 Bhagya Hettige , Yuan-Fang Li , Weiqing Wang , Suong Le , Wray Buntine

In this study, we focus on the graph representation learning (a.k.a. network embedding) in attributed graphs. Different from existing embedding methods that treat the incorporation of graph structure and semantic as the simple combination…

Social and Information Networks · Computer Science 2023-05-12 Meng Qin

The graph structure is a commonly used data storage mode, and it turns out that the low-dimensional embedded representation of nodes in the graph is extremely useful in various typical tasks, such as node classification, link prediction ,…

Social and Information Networks · Computer Science 2020-08-03 Xing Li , Wei Wei , Xiangnan Feng , Xue Liu , Zhiming Zheng

A central question in neuroscience is how self-organizing dynamic interactions in the brain emerge on their relatively static structural backbone. Due to the complexity of spatial and temporal dependencies between different brain areas,…

Neurons and Cognition · Quantitative Biology 2020-10-15 Simon Wein , Wilhelm Malloni , Ana Maria Tomé , Sebastian M. Frank , Gina-Isabelle Henze , Stefan Wüst , Mark W. Greenlee , Elmar W. Lang

Temporal graphs exhibit dynamic interactions between nodes over continuous time, whose topologies evolve with time elapsing. The whole temporal neighborhood of nodes reveals the varying preferences of nodes. However, previous works usually…

Machine Learning · Computer Science 2023-04-18 Tongya Zheng , Xinchao Wang , Zunlei Feng , Jie Song , Yunzhi Hao , Mingli Song , Xingen Wang , Xinyu Wang , Chun Chen

While large language models (LLMs) show great potential in temporal reasoning, most existing work focuses heavily on enhancing performance, often neglecting the explainable reasoning processes underlying the results. To address this gap, we…

Computation and Language · Computer Science 2025-05-22 Zihao Jiang , Ben Liu , Miao Peng , Wenjie Xu , Yao Xiao , Zhenyan Shan , Min Peng

Non-linear kernel methods can be approximated by fast linear ones using suitable explicit feature maps allowing their application to large scale problems. We investigate how convolution kernels for structured data are composed from base…

Machine Learning · Computer Science 2019-11-26 Nils M. Kriege , Marion Neumann , Christopher Morris , Kristian Kersting , Petra Mutzel

We introduce the idea of temporal graphs, a representation that encodes temporal data into graphs while fully retaining the temporal information of the original data. This representation lets us explore the dynamic temporal properties of…

Physics and Society · Physics 2013-06-06 Vassilis Kostakos

Understanding the dynamic reorganization of brain networks is critical for predicting cognitive decline, neurological progression, and individual variability in clinical outcomes. This work proposes a multimodal graph neural network…

Machine Learning · Computer Science 2026-02-11 Preksha Girish , Rachana Mysore , Kiran K. N. , Hiranmayee R. , Shipra Prashanth , Shrey Kumar

The Weisfeiler-Lehman graph kernels are among the most prevalent graph kernels due to their remarkable time complexity and predictive performance. Their key concept is based on an implicit comparison of neighborhood representing trees with…

Machine Learning · Computer Science 2021-01-21 Till Hendrik Schulz , Tamás Horváth , Pascal Welke , Stefan Wrobel

Relational reasoning lies at the core of many NLP tasks, drawing on complementary signals from text and graphs. While prior research has investigated how to leverage this dual complementarity, a detailed and systematic understanding of…

Artificial Intelligence · Computer Science 2026-01-28 Zhen Wu , Ritam Dutt , Luke M. Breitfeller , Armineh Nourbakhsh , Siddharth Parekh , Carolyn Rosé
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