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Given a connected vertex-weighted graph $G$, the maximum weight internal spanning tree (MaxwIST) problem asks for a spanning tree of $G$ that maximizes the total weight of internal nodes. This problem is NP-hard and APX-hard, with the…
We present a general method of designing fast approximation algorithms for cut-based minimization problems in undirected graphs. In particular, we develop a technique that given any such problem that can be approximated quickly on trees,…
For the General Factor problem we are given an undirected graph $G$ and for each vertex $v\in V(G)$ a finite set $B_v$ of non-negative integers. The task is to decide if there is a subset $S\subseteq E(G)$ such that $deg_S(v)\in B_v$ for…
A monotone drawing of a graph G is a straight-line drawing of G such that every pair of vertices is connected by a path that is monotone with respect to some direction. Trees, as a special class of graphs, have been the focus of several…
We show that every graph $G$ excluding an apex-forest $H$ as a minor has layered pathwidth at most $|V(H)|-2$, and that every graph $G$ excluding an apex-linear forest (such as a fan) $H$ as a minor has layered treedepth at most $|V(H)|-2$.…
The mean subtree order of a given graph $G$, denoted $\mu(G)$, is the average number of vertices in a subtree of $G$. Let $G$ be a connected graph. Chin, Gordon, MacPhee, and Vincent [J. Graph Theory, 89(4): 413-438, 2018] conjectured that…
Embeddings of graphs into distributions of trees that preserve distances in expectation are a cornerstone of many optimization algorithms. Unfortunately, online or dynamic algorithms which use these embeddings seem inherently randomized and…
Variational approximation, such as mean-field (MF) and tree-reweighted (TRW), provide a computationally efficient approximation of the log-partition function for a generic graphical model. TRW provably provides an upper bound, but the…
In this paper we consider generalized flow problems where there is an $m$-edge $n$-node directed graph $G = (V,E)$ and each edge $e \in E$ has a loss factor $\gamma_e >0$ governing whether the flow is increased or decreased as it crosses…
In this paper we show how to find nearly optimal embeddings of large trees in several natural classes of graphs. The size of the tree T can be as large as a constant fraction of the size of the graph G, and the maximum degree of T can be…
The notion of $\mathcal{H}$-treewidth, where $\mathcal{H}$ is a hereditary graph class, was recently introduced as a generalization of the treewidth of an undirected graph. Roughly speaking, a graph of $\mathcal{H}$-treewidth at most $k$…
We introduce a graph partitioning problem motivated by computational topology and propose two algorithms that produce approximate solutions. Specifically, given a weighted, undirected graph $G$ and a positive integer $k$, we desire to find…
Random spanning trees of a graph $G$ are governed by a corresponding probability mass distribution (or "law"), $\mu$, defined on the set of all spanning trees of $G$. This paper addresses the problem of choosing $\mu$ in order to utilize…
Min-Cut queries are fundamental: Preprocess an undirected edge-weighted graph, to quickly report a minimum-weight cut that separates a query pair of nodes $s,t$. The best data structure known for this problem simply builds a cut-equivalent…
The treedepth of a graph $G$ is the least possible depth of an elimination forest of $G$: a rooted forest on the same vertex set where every pair of vertices adjacent in $G$ is bound by the ancestor/descendant relation. We propose an…
Let $G = (VG, AG)$ be a directed graph with a set $S \subseteq VG$ of terminals and nonnegative integer arc capacities $c$. A feasible multiflow is a nonnegative real function $F(P)$ of "flows" on paths $P$ connecting distinct terminals…
In the minimum Multicut problem, the input is an edge-weighted supply graph $G=(V,E)$ and a simple demand graph $H=(V,F)$. Either $G$ and $H$ are directed (DMulC) or both are undirected (UMulC). The goal is to remove a minimum weight set of…
Given graphs $H$ and $G$, possibly with vertex-colors, a homomorphism is a function $f:V(H)\to V(G)$ that preserves colors and edges. Many interesting counting problems (e.g., subgraph and induced subgraph counts) are finite linear…
In this paper, we study the graph classification problem from the graph homomorphism perspective. We consider the homomorphisms from $F$ to $G$, where $G$ is a graph of interest (e.g. molecules or social networks) and $F$ belongs to some…
Constructing the maximum spanning tree $T$ of an edge-weighted connected graph $G$ is one of the important research topics in computer science and optimization, and the related research results have played an active role in practical…