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Accurately predicting drug responses to cancer is an important problem hindering oncologists' efforts to find the most effective drugs to treat cancer, which is a core goal in precision medicine. The scientific community has focused on…

Machine Learning · Computer Science 2016-12-06 Turki Turki , Zhi Wei

The area under the ROC curve (AUC) is the standard measure of a biomarker's discriminatory accuracy; however, naive AUC estimates can be misleading when validation cohorts differ from the intended target population. Such covariate shifts…

Methodology · Statistics 2025-11-20 Jiajun Liu , Guangcai Mao , Xiaofei Wang

Clinical trials play an important role in cancer care and research, yet participation rates remain low. We developed MSK-MATCH (Memorial Sloan Kettering Multi-Agent Trial Coordination Hub), an AI system for automated eligibility screening…

Machine Learning · Computer Science 2025-11-11 Jacob T. Rosenthal , Emma Hahesy , Sulov Chalise , Menglei Zhu , Mert R. Sabuncu , Lior Z. Braunstein , Anyi Li

Multidisciplinary team (MDT) consultations are the gold standard for cancer care decision-making, yet current practice lacks structured mechanisms for quantifying consensus and ensuring decision traceability. We introduce a Multi-Agent…

Multiagent Systems · Computer Science 2025-12-17 Xudong Han , Xianglun Gao , Xiaoyi Qu , Zhenyu Yu

Motivation: The size of available omics datasets is steadily increasing with technological advancement in recent years. While this increase in sample size can be used to improve the performance of relevant prediction tasks in healthcare,…

Quantitative Methods · Quantitative Biology 2023-05-04 Jonas C. Ditz , Bernhard Reuter , Nico Pfeifer

In oncology, recurrence after treatment is one of the major challenges, related to patients' survival and quality of life. Conventionally, prediction of cancer relapse has always relied on clinical observation with statistical model…

Machine Learning · Computer Science 2025-02-25 Muhammad Umer Qayyum , Muhammad Fahad , Nasrullah Abbasi

We present CAIA, a benchmark exposing a critical blind spot in AI evaluation: the inability of state-of-the-art models to operate in adversarial, high-stakes environments where misinformation is weaponized and errors are irreversible. While…

Artificial Intelligence · Computer Science 2026-01-21 Zeshi Dai , Zimo Peng , Zerui Cheng , Ryan Yihe Li

Objective Neoadjuvant chemotherapy (NACT) is one kind of treatment for advanced stage ovarian cancer patients. However, due to the nature of tumor heterogeneity, the clinical outcomes to NACT vary significantly among different subgroups.…

Computer Vision and Pattern Recognition · Computer Science 2024-07-04 Ke Zhang , Neman Abdoli , Patrik Gilley , Youkabed Sadri , Xuxin Chen , Theresa C. Thai , Lauren Dockery , Kathleen Moore , Robert S. Mannel , Yuchen Qiu

The potential benefits of applying machine learning methods to -omics data are becoming increasingly apparent, especially in clinical settings. However, the unique characteristics of these data are not always well suited to machine learning…

Advances in machine learning have created new opportunities to develop artificial intelligence (AI)-based clinical decision support systems using past clinical data and improve diagnosis decisions in life-threatening illnesses such breast…

Human-Computer Interaction · Computer Science 2024-12-17 Olya Rezaeian , Onur Asan , Alparslan Emrah Bayrak

For head and neck cancer (HNC) patients, prognostic outcome prediction can support personalized treatment strategy selection. Improving prediction performance of HNC outcomes has been extensively explored by using advanced artificial…

Computer Vision and Pattern Recognition · Computer Science 2026-04-20 Baoqiang Ma , Djennifer K. Madzia-Madzou , Rosa C. J. Kraaijveld , Jin Ouyang

Background: Lung cancer ranks as the leading cause of cancer-related mortality worldwide. The complexity of tumor delineation, crucial for radiation therapy, requires expertise often unavailable in resource-limited settings. Artificial…

Image and Video Processing · Electrical Eng. & Systems 2025-03-20 Yi Luo , Hamed Hooshangnejad , Xue Feng , Gaofeng Huang , Xiaojian Chen , Rui Zhang , Quan Chen , Wil Ngwa , Kai Ding

AI Assurance -- producing the machine-readable evidence required to demonstrate compliance with AI governance frameworks -- has mature policy scaffolding but lacks the infrastructure to operationalize it. Organizations building high-risk AI…

Ovarian cancer is the most lethal gynecologic malignancy: around 60% of patients are diagnosed at an advanced stage, with an associated 5-year survival rate of about 30%. Early identification of non-responders to neoadjuvant chemotherapy…

Background: Colorectal adenocarcinoma (CRC) remains a leading cause of cancer-related mortality worldwide, with variable patient outcomes despite treatment advances. Traditional prognostic methods based on clinicopathological variables…

Quantitative Methods · Quantitative Biology 2025-07-28 Oluwafemi Ogundare

Artificial intelligence (AI) methodologies hold great promise for the rapid and accurate diagnosis of coronary artery disease (CAD) from intravascular optical coherent tomography (IVOCT) images. Numerous papers have been published…

Image and Video Processing · Electrical Eng. & Systems 2025-02-03 Xu Chen , Yuan Huang , Benn Jessney , Jason Sangha , Sophie Gu , Carola-Bibiane Schönlieb , Martin Bennett , Michael Roberts

Cases of laryngeal cancer are predicted to rise significantly in the coming years. Current diagnostic pathways are inefficient, putting undue stress on both patients and the medical system. Artificial intelligence offers a promising…

Sound · Computer Science 2025-05-14 Mary Paterson , James Moor , Luisa Cutillo

Motivation Modern molecular sequence analysis increasingly relies on automated and robust software tools for interpretation, annotation, and biological insight. The Analysis of Orthologous Collections (AOC) application automates the…

Genomics · Quantitative Biology 2024-06-17 Alexander Lucaci , Sergei Pond

Background The cost of drug discovery and development is substantial, with clinical trial outcomes playing a critical role in regulatory approval and patient care. However, access to large-scale, high-quality clinical trial outcome data…

Artificial Intelligence · Computer Science 2025-03-07 Chufan Gao , Jathurshan Pradeepkumar , Trisha Das , Shivashankar Thati , Jimeng Sun

Large language model (LLM) agents offer a promising data-driven approach to automating Site Reliability Engineering (SRE), yet their enterprise deployment is constrained by three challenges: restricted access to proprietary data, unsafe…