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Topological materials have become the focus of intense research in recent years, since they exhibit fundamentally new physical phenomena with potential applications for novel devices and quantum information technology. One of the hallmarks…

Mesoscale and Nanoscale Physics · Physics 2016-09-01 Ching-Kai Chiu , Jeffrey C. Y. Teo , Andreas P. Schnyder , Shinsei Ryu

Synchronization in a group of linear time-invariant systems is studied where the coupling between each pair of systems is characterized by a different output matrix. Simple methods are proposed to generate a (separate) linear coupling gain…

Dynamical Systems · Mathematics 2015-05-04 S. Emre Tuna

Interpreting graph neural networks (GNNs) is difficult because message passing mixes signals and internal channels rarely align with human concepts. We study superposition, the sharing of directions by multiple features, directly in the…

Machine Learning · Computer Science 2026-01-19 Lukas Pertl , Han Xuanyuan , Pietro Liò

This is a survey article on trees, with a modest number of proofs to give a flavor of the way these topologies can be efficiently handled. Trees are defined in set-theorist fashion as partially ordered sets in which the elements below each…

General Topology · Mathematics 2007-05-23 Peter J. Nyikos

In this paper, the problem of matching pairs of correlated random graphs with multi-valued edge attributes is considered. Graph matching problems of this nature arise in several settings of practical interest including social network…

Information Theory · Computer Science 2018-02-06 F. Shirani , S. Garg , E. Erkip

Hierarchical clustering is a popular unsupervised data analysis method. For many real-world applications, we would like to exploit prior information about the data that imposes constraints on the clustering hierarchy, and is not captured by…

Data Structures and Algorithms · Computer Science 2018-07-17 Vaggos Chatziafratis , Rad Niazadeh , Moses Charikar

Modern methods of graph theory describe a graph up to isomorphism, which makes it difficult to create mathematical models for visualizing graph drawings on a plane. The topological drawing of the planar part of a graph allows representing…

Combinatorics · Mathematics 2024-08-01 Sergey Kurapov , Maxim Davidovsky

These are lecture notes for the Current Developments in Mathematics conference at Harvard, November, 2011. We discuss topological, probabilistic and combinatorial aspects of the Laplacian on a graph embedded on a surface. The three main…

Probability · Mathematics 2012-03-07 Richard Kenyon

We introduce a graph-theoretic approach to extract clusters and hierarchies in complex data-sets in an unsupervised and deterministic manner, without the use of any prior information. This is achieved by building topologically embedded…

Data Analysis, Statistics and Probability · Physics 2014-02-13 Won-Min Song , T. Di Matteo , Tomaso Aste

In this paper, we focus on the unsupervised multi-view feature selection which tries to handle high dimensional data in the field of multi-view learning. Although some graph-based methods have achieved satisfactory performance, they ignore…

Machine Learning · Computer Science 2021-04-13 Qi Wang , Xu Jiang , Mulin Chen , Xuelong Li

We propose a novel method for topological analysis of unweighted graphs which is based on \textit{persistent homology}. The proposed method maps the input graph to a complete weighted graph where the weighting function maps each edge to a…

Algebraic Topology · Mathematics 2020-07-31 Padraig Corcoran

Network alignment aims to find regions of topological or functional similarities between networks. In computational biology, it can be used to transfer biological knowledge from a well-studied species to a poorly-studied species between…

Molecular Networks · Quantitative Biology 2014-10-21 Joseph Crawford , Tijana Milenković

The statistical mechanical approach to complex networks is the dominant paradigm in describing natural and societal complex systems. The study of network properties, and their implications on dynamical processes, mostly focus on locally…

Statistical Mechanics · Physics 2013-06-27 Giovanni Petri , Martina Scolamiero , Irene Donato , Francesco Vaccarino

Existing results on decomposition methods and algorithms for nonconvex problems are minimal. Parallel decomposition algorithms do not exist for nonconvex problems with coupling nonlinear equality constraints. Besides, decomposition…

Optimization and Control · Mathematics 2026-05-18 Yiqing Zhai , Ying Cui , Danny H. K. Tsang

Conformal prediction provides rigorous, distribution-free uncertainty guarantees, but often yields prohibitively large prediction sets in structured domains such as routing, planning, or sequential recommendation. We introduce "graph-based…

Machine Learning · Computer Science 2026-03-31 Sreenivas Gollapudi , Kostas Kollias , Kamesh Munagala , Aravindan Vijayaraghavan

Neural networks encode inputs as high-dimensional vectors, known as representations, that capture how models process data by encoding task-relevant structure and semantics. Representation alignment refers to the degree to which different…

Computational Geometry · Computer Science 2026-05-26 Xinyuan Yan , Rita Sevastjanova , Mennatallah El-Assady , Bei Wang

We develop the method of averaging in Clifford (geometric) algebras suggested by the author in previous papers. We consider operators constructed using two different sets of anticommuting elements of real or complexified Clifford algebras.…

Mathematical Physics · Physics 2023-08-24 D. S. Shirokov

Topological drawings are natural representations of graphs in the plane, where vertices are represented by points, and edges by curves connecting the points. Topological drawings of complete graphs and of complete bipartite graphs have been…

Computational Geometry · Computer Science 2017-02-10 Jean Cardinal , Stefan Felsner

In this chapter, we identify fundamental geometric structures that underlie the problems of sampling, optimisation, inference and adaptive decision-making. Based on this identification, we derive algorithms that exploit these geometric…

We investigate the new, Turing-complete class of layered systems, whose lefthand sides of rules can only be overlapped at a multiset of disjoint or equal positions. Layered systems define a natural notion of rank for terms: the maximal…

Logic in Computer Science · Computer Science 2015-09-16 Jean-Pierre Jouannaud , Jiaxiang Liu , Mizuhito Ogawa
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