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In this paper, we present an automated pipeline for generating domain-specific synthetic datasets with diffusion models, addressing the distribution shift between pre-trained models and real-world deployment environments. Our three-stage…

Computer Vision and Pattern Recognition · Computer Science 2026-01-14 Dongsik Yoon , Jongeun Kim

Detecting predictive biomarkers from multi-omics data is important for precision medicine, to improve diagnostics of complex diseases and for better treatments. This needs substantial experimental efforts that are made difficult by the…

Quantitative Methods · Quantitative Biology 2021-06-08 Betül Güvenç Paltun , Samuel Kaski , Hiroshi Mamitsuka

We propose self-diffusion, a novel framework for solving inverse problems without relying on pretrained generative models. Traditional diffusion-based approaches require training a model on a clean dataset to learn to reverse the forward…

Machine Learning · Computer Science 2025-12-09 Guanxiong Luo , Shoujin Huang , Yanlong Yang

Diffusion-based methods represented as stochastic differential equations on a continuous-time domain have recently proven successful as a non-adversarial generative model. Training such models relies on denoising score matching, which can…

Machine Learning · Computer Science 2024-11-05 Sarthak Mittal , Korbinian Abstreiter , Stefan Bauer , Bernhard Schölkopf , Arash Mehrjou

We aim to leverage diffusion to address the challenging image matting task. However, the presence of high computational overhead and the inconsistency of noise sampling between the training and inference processes pose significant obstacles…

Computer Vision and Pattern Recognition · Computer Science 2024-12-05 Yihan Hu , Yiheng Lin , Wei Wang , Yao Zhao , Yunchao Wei , Humphrey Shi

Structured (dictionary-like) data presents challenges for left-to-right language models, as they can struggle with structured entities for a wide variety of reasons such as formatting and sensitivity to the order in which attributes are…

Machine Learning · Computer Science 2024-02-08 Ouail Kitouni , Niklas Nolte , James Hensman , Bhaskar Mitra

Protein structure prediction has reached revolutionary levels of accuracy on single structures, yet distributional modeling paradigms are needed to capture the conformational ensembles and flexibility that underlie biological function.…

Biomolecules · Quantitative Biology 2023-04-06 Bowen Jing , Ezra Erives , Peter Pao-Huang , Gabriele Corso , Bonnie Berger , Tommi Jaakkola

Diffusion probabilistic models (DPMs) have shown remarkable results on various image synthesis tasks such as text-to-image generation and image inpainting. However, compared to other generative methods like VAEs and GANs, DPMs lack a…

Computer Vision and Pattern Recognition · Computer Science 2023-07-13 Yipeng Leng , Qiangjuan Huang , Zhiyuan Wang , Yangyang Liu , Haoyu Zhang

Controllable layout generation aims at synthesizing plausible arrangement of element bounding boxes with optional constraints, such as type or position of a specific element. In this work, we try to solve a broad range of layout generation…

Computer Vision and Pattern Recognition · Computer Science 2023-03-15 Naoto Inoue , Kotaro Kikuchi , Edgar Simo-Serra , Mayu Otani , Kota Yamaguchi

Diffusion-based super-resolution (SR) models have recently garnered significant attention due to their potent restoration capabilities. But conventional diffusion models perform noise sampling from a single distribution, constraining their…

Computer Vision and Pattern Recognition · Computer Science 2025-02-13 Chengcheng Wang , Zhiwei Hao , Yehui Tang , Jianyuan Guo , Yujie Yang , Kai Han , Yunhe Wang

In diffusion models, deviations from a straight generative flow are a common issue, resulting in semantic inconsistencies and suboptimal generations. To address this challenge, we introduce `Non-Cross Diffusion', an innovative approach in…

Machine Learning · Computer Science 2024-11-05 Ziyang Zheng , Ruiyuan Gao , Qiang Xu

Diffusion models for continuous data gained widespread adoption owing to their high quality generation and control mechanisms. However, controllable diffusion on discrete data faces challenges given that continuous guidance methods do not…

Diffusion-Map-AutoEncoder (DMAE) pairs a diffusion-map encoder (using the Nystr\"om method) with linear or RBF Gaussian-Process latent mean decoders, yielding closed-form inductive mappings and strong reconstructions.

Data Structures and Algorithms · Computer Science 2025-10-31 Julio Candanedo

We propose a deep learning framework for modeling complex high-dimensional densities called Non-linear Independent Component Estimation (NICE). It is based on the idea that a good representation is one in which the data has a distribution…

Machine Learning · Computer Science 2015-04-13 Laurent Dinh , David Krueger , Yoshua Bengio

End-to-end learning has emerged as a transformative paradigm in autonomous driving. However, the inherently multimodal nature of driving behaviors and the generalization challenges in long-tail scenarios remain critical obstacles to robust…

Robotics · Computer Science 2025-05-27 Rui Zhao , Yuze Fan , Ziguo Chen , Fei Gao , Zhenhai Gao

Diffusion models have been demonstrated as strong priors for solving general inverse problems. Most existing Diffusion model-based Inverse Problem Solvers (DIS) employ a plug-and-play approach to guide the sampling trajectory with either…

Computer Vision and Pattern Recognition · Computer Science 2024-07-18 Jiankun Zhao , Bowen Song , Liyue Shen

The task here is to predict the toxicological activity of chemical compounds based on the Tox21 dataset, a benchmark in computational toxicology. After a domain-specific overview of chemical toxicity, we discuss current computational…

Machine Learning · Computer Science 2025-10-28 Eduard Popescu , Adrian Groza , Andreea Cernat

Diffusion-based inpainting is a powerful tool for the reconstruction of images from sparse data. Its quality strongly depends on the choice of known data. Optimising their spatial location -- the inpainting mask -- is challenging. A…

Image and Video Processing · Electrical Eng. & Systems 2022-05-17 Tobias Alt , Pascal Peter , Joachim Weickert

Diffusion models have recently emerged as powerful stochastic frameworks for high-dimensional inference and generation. However, existing applications to partial differential equations (PDEs) predominantly rely on physics-informed training…

Numerical Analysis · Mathematics 2026-04-03 Yi Bing , Liu Jia , Fu Jinyang , Peng Xiang

While diffusion models excel at image synthesis, useful representations have been shown to emerge from generative pre-training, suggesting a path towards unified generative and discriminative learning. However, suboptimal semantic flow…

Computer Vision and Pattern Recognition · Computer Science 2025-12-23 Weilai Xiang , Hongyu Yang , Di Huang , Yunhong Wang