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We analyze the trapping of diffusing ligands, modeled as Brownian particles, by a sphere that has $N$ partially reactive boundary patches, each of small area and arbitrary shape, on an otherwise reflecting boundary. For such a structured…

Analysis of PDEs · Mathematics 2026-01-08 Denis S. Grebenkov , Michael J. Ward

We consider steady-state diffusion in a three-dimensional bounded domain with a smooth reflecting boundary that is partially covered by small partially reactive patches. By using the method of matched asymptotic expansions, we investigate…

Analysis of PDEs · Mathematics 2025-10-01 Denis S. Grebenkov , Michael J. Ward

Finding accurate approximations for the effective reactivity of a structured spherical target with a circular absorbing patch of arbitrary size is a long-standing problem in chemical physics. In this Communication, we reveal limitations of…

Chemical Physics · Physics 2025-07-16 Denis S. Grebenkov

The capacitance of an arbitrarily shaped object is calculated with the same second-kind integral equation method used for computing static and dynamic polarizabilities. The capacitance is simply the dielectric permittivity multiplied by the…

Mesoscale and Nanoscale Physics · Physics 2014-01-09 Titus Sandu , George Boldeiu , Victor Moagar-Poladian

We employ a general spectral approach based on the Steklov eigenbasis to describe imperfect diffusion-controlled reactions on bounded reactive targets in three dimensions. The steady-state concentration and the total diffusive flux onto the…

Chemical Physics · Physics 2025-05-01 Denis S. Grebenkov

The spatial variation and temporal variation in surface potential are important error sources in various precision experiments and deserved to be considered carefully. In the former case, the theoretical analysis shows that this effect…

Soft Condensed Matter · Physics 2023-03-29 Jun Ke , Wen-Can Dong , Sheng-Hua Huang , Yu-Jie Tan , Wen-Hai Tan , Shan-Qing Yang , Cheng-Gang Shao , Jie Luo

We study, from first principles, the pressure exerted by an active fluid of spherical particles on general boundaries in two dimensions. We show that, despite the non-uniform pressure along curved walls, an equation of state is recovered…

Statistical Mechanics · Physics 2016-08-31 Nikolai Nikola , Alexandre P. Solon , Yariv Kafri , Mehran Kardar , Julien Tailleur , Raphaël Voituriez

We consider the kinetics of the imperfect narrow escape problem, i.e. the time it takes for a particle diffusing in a confined medium of generic shape to reach and to be adsorbed by a small, imperfectly reactive patch embedded in the…

Statistical Mechanics · Physics 2023-05-11 T. Guérin , M. Dolgushev , O. Bénichou , R. Voituriez

We evaluate the electrostatic interaction energy between two surfaces, one flat and the other slightly curved, in terms of the two-point autocorrelation functions for patch potentials on each one of them, and of a single function $\psi$…

High Energy Physics - Theory · Physics 2015-06-17 C. D. Fosco , F. C. Lombardo , F. D. Mazzitelli

A general topic of current interest is the analysis of diffusion problems in singularly perturbed domains with small interior targets or traps (the narrow capture problem). One major application is to intracellular diffusion, where the…

Statistical Mechanics · Physics 2022-04-13 Paul C. Bressloff

We propose a general theoretical description of chemical reactions occurring on a catalytic surface with heterogeneous reactivity. The propagator of a diffusion-reaction process with eventual absorption on the heterogeneous partially…

Chemical Physics · Physics 2019-11-05 Denis S. Grebenkov

We study diffusion of particles on the surface of a sphere toward a partially reactive circular target with partly reversible binding kinetics. We solve the coupled diffusion-reaction equations and obtain the exact expressions for the…

Statistical Mechanics · Physics 2019-11-05 Denis S. Grebenkov

We consider two ultracold particles confined in spherically symmetric harmonic trap and interacting via isotropic potential with absorbing boundary conditions at short range that models reactive scattering. First, we apply the contact…

Quantum Physics · Physics 2016-06-01 Joanna Jankowska , Zbigniew Idziaszek

A wide variety of physical, chemical, and biological processes involve diffusive particles interacting with surfaces containing reactive patches. The theory of boundary homogenization seeks to encapsulate the effective reactivity of such a…

Statistical Mechanics · Physics 2024-05-21 Claire E Plunkett , Sean D Lawley

Recent studies have highlighted the sensitivity of active matter to boundaries and their geometries. Here we develop a general theory for the dynamics and statistics of active particles on curved surfaces and illustrate it on two examples.…

Soft Condensed Matter · Physics 2016-01-15 Yaouen Fily , Aparna Baskaran , Michael F. Hagan

Active particles under soft confinement such as droplets or vesicles present intriguing phenomena, as collective motion emerges alongside the deformation of the environment. A model is employed to systematically investigate droplet…

Soft Condensed Matter · Physics 2024-07-25 Javier Diaz , Ignacio Pagonabarraga

In this paper we develop a hybrid version of the encounter-based approach to diffusion-mediated absorption at a reactive surface, which takes into account stochastic switching of a diffusing particle's conformational state. For simplicity,…

Statistical Mechanics · Physics 2022-09-21 Paul C. Bressloff

We study the electromagnetic fields of an arbitrarily moving charged particle and the radiation reaction on the charged particle using a novel approach. We first show that the fields of an arbitrarily moving charged particle in an inertial…

Classical Physics · Physics 2009-10-30 Abhinav Gupta , T. Padmanabhan

Open lattices are characterized by low volume-fraction arrangements of building blocks, low coordination number, and open spaces between building blocks. The self-assembly of these lattices faces the challenge of mechanical instability due…

Soft Condensed Matter · Physics 2013-06-25 Xiaoming Mao

Motivated by observations of heterogeneous domain structure on the surface of cells, we consider a minimal model to describe the dynamics of phase separation on the surface of a spherical particle. Finite-size effects on the curved particle…

Soft Condensed Matter · Physics 2016-07-13 Matthias C. Bott , Joseph M. Brader
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