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Data Distribution Service (DDS) is an innovative approach towards communication in ICS/IoT infrastructure and robotics. Being based on the cross-platform and cross-language API to be applicable in any computerised device, it offers the…

Machine Learning · Computer Science 2021-06-15 Stanislav Abaimov

Monocular 3D object detection is a low-cost but challenging task, as it requires generating accurate 3D localization solely from a single image input. Recent developed depth-assisted methods show promising results by using explicit depth…

Computer Vision and Pattern Recognition · Computer Science 2023-07-04 Zizhang Wu , Yunzhe Wu , Jian Pu , Xianzhi Li , Xiaoquan Wang

The escalating frequency of intrusions in networked systems has spurred the exploration of new research avenues in devising artificial intelligence (AI) techniques for intrusion detection systems (IDS). Various AI techniques have been used…

Cryptography and Security · Computer Science 2024-10-22 Ismail Bibers , Osvaldo Arreche , Mustafa Abdallah

The quest for accurate prediction of drug molecule properties poses a fundamental challenge in the realm of Artificial Intelligence Drug Discovery (AIDD). An effective representation of drug molecules emerges as a pivotal component in this…

Machine Learning · Computer Science 2024-04-22 Zhuoyuan Wang , Jiacong Mi , Shan Lu , Jieyue He

In silico prediction of the ligand binding pose to a given protein target is a crucial but challenging task in drug discovery. This work focuses on blind flexible selfdocking, where we aim to predict the positions, orientations and…

Biomolecules · Quantitative Biology 2023-06-02 Yangtian Zhang , Huiyu Cai , Chence Shi , Bozitao Zhong , Jian Tang

As the development of neural networks, more and more deep neural networks are adopted in various tasks, such as image classification. However, as the huge computational overhead, these networks could not be applied on mobile devices or…

Computer Vision and Pattern Recognition · Computer Science 2019-12-03 Yunteng Luan , Hanyu Zhao , Zhi Yang , Yafei Dai

Currently, the field of structure-based drug design is dominated by three main types of algorithms: search-based algorithms, deep generative models, and reinforcement learning. While existing works have typically focused on comparing models…

Machine Learning · Computer Science 2026-01-22 Kangyu Zheng , Kai Zhang , Jiale Tan , Xuehan Chen , Yingzhou Lu , Zaixi Zhang , Lichao Sun , Marinka Zitnik , Tianfan Fu , Zhiding Liang

Computational drug discovery strategies can be broadly placed in two categories: ligand-based methods which identify novel molecules by similarity with known ligands, and structure-based methods which predict molecules with high-affinity to…

Quantitative Methods · Quantitative Biology 2019-05-30 Vincent Mallet , Carlos G. Oliver , Nicolas Moitessier , Jerome Waldispuhl

Consistency and reliability are crucial for conducting AI research. Many famous research fields, such as object detection, have been compared and validated with solid benchmark frameworks. After AlphaFold2, the protein folding task has…

Biomolecules · Quantitative Biology 2023-08-01 Jaemyung Lee , Kyeongtak Han , Jaehoon Kim , Hasun Yu , Youhan Lee

Remote sensing image interpretation plays a critical role in environmental monitoring, urban planning, and disaster assessment. However, acquiring high-quality labeled data is often costly and time-consuming. To address this challenge, we…

Computer Vision and Pattern Recognition · Computer Science 2026-01-27 Tong Wang , Guanzhou Chen , Xiaodong Zhang , Chenxi Liu , Jiaqi Wang , Xiaoliang Tan , Wenchao Guo , Qingyuan Yang , Kaiqi Zhang

The three-dimensional shape and conformation of small-molecule ligands are critical for biomolecular recognition, yet encoding 3D geometry has not improved ligand-based virtual screening approaches. We describe an end-to-end deep learning…

Machine Learning · Computer Science 2020-12-01 Kangway V. Chuang , Michael J. Keiser

Predicting a ligand's bound pose to a target protein is a key component of early-stage computational drug discovery. Recent developments in machine learning methods have focused on improving pose quality at the cost of model runtime. For…

Biomolecules · Quantitative Biology 2024-10-23 Wojtek Treyde , Seohyun Chris Kim , Nazim Bouatta , Mohammed AlQuraishi

Molecular docking is a pivotal process in drug discovery. While traditional techniques rely on extensive sampling and simulation governed by physical principles, these methods are often slow and costly. The advent of deep learning-based…

Biomolecules · Quantitative Biology 2025-02-25 Kaiyuan Gao , Qizhi Pei , Gongbo Zhang , Jinhua Zhu , Kun He , Lijun Wu

Recent advancements in biology and chemistry have leveraged multi-modal learning, integrating molecules and their natural language descriptions to enhance drug discovery. However, current pre-training frameworks are limited to two…

Machine Learning · Computer Science 2025-02-05 Teng Xiao , Chao Cui , Huaisheng Zhu , Vasant G. Honavar

Feature matching is a cornerstone task in computer vision, essential for applications such as image retrieval, stereo matching, 3D reconstruction, and SLAM. This survey comprehensively reviews modality-based feature matching, exploring…

Computer Vision and Pattern Recognition · Computer Science 2025-07-31 Weide Liu , Wei Zhou , Jun Liu , Ping Hu , Jun Cheng , Jungong Han , Weisi Lin

Adaptive gradient approaches that automatically adjust the learning rate on a per-feature basis have been very popular for training deep networks. This rich class of algorithms includes Adagrad, RMSprop, Adam, and recent extensions. All…

Machine Learning · Computer Science 2019-05-28 Jihun Yun , Aurelie C. Lozano , Eunho Yang

The success of deep learning (DL) is often achieved with large models and high complexity during both training and post-training inferences, hindering training in resource-limited settings. To alleviate these issues, this paper introduces a…

Machine Learning · Computer Science 2025-01-20 En-hui Yang , Shayan Mohajer Hamidi

In the rapidly evolving field of autonomous driving, precise segmentation of LiDAR data is crucial for understanding complex 3D environments. Traditional approaches often rely on disparate, standalone codebases, hindering unified…

Computer Vision and Pattern Recognition · Computer Science 2024-05-31 Jiahao Sun , Chunmei Qing , Xiang Xu , Lingdong Kong , Youquan Liu , Li Li , Chenming Zhu , Jingwei Zhang , Zeqi Xiao , Runnan Chen , Tai Wang , Wenwei Zhang , Kai Chen

Existing protein-ligand docking studies typically focus on the self-docking scenario, which is less practical in real applications. Moreover, some studies involve heavy frameworks requiring extensive training, posing challenges for…

Advancements in AI for science unlocks capabilities for critical drug discovery tasks such as protein-ligand binding affinity prediction. However, current models overfit to existing oversimplified datasets that does not represent naturally…

Machine Learning · Computer Science 2025-12-02 Ming-Hsiu Wu , Ziqian Xie , Shuiwang Ji , Degui Zhi