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Supralinear and sublinear pre-synaptic and dendritic integration is considered to be responsible for nonlinear computation power of biological neurons, emphasizing the role of nonlinear integration as opposed to nonlinear output…

Neural and Evolutionary Computing · Computer Science 2015-04-28 Alireza Goudarzi , Alireza Shabani , Darko Stefanovic

Echo State Networks (ESNs) are typically presented as efficient, readout-trained recurrent models, yet their dynamics and design are often guided by heuristics rather than first principles. We recast ESNs explicitly as state-space models…

Machine Learning · Computer Science 2025-09-05 Pradeep Singh , Balasubramanian Raman

We explore a biomimetic model that simulates a cell, with the internal cytoplasm represented by a two-dimensional circular domain and the external cortex by a surrounding ring, both modeled using FitzHugh-Nagumo systems. The external ring…

Pattern Formation and Solitons · Physics 2025-01-08 Daniel Cebrián-Lacasa , Marcin Leda , Andrew B. Goryachev , Lendert Gelens

The reaction-diffusion system of Fitzhugh Nagumo is considered. The initial- boundary problems with Neumann and Dirichlet conditions are analyzed. By means of an equivalent semilinear integrodifferential equation which characterizes several…

Mathematical Physics · Physics 2013-04-17 M. De Angelis

Characterizing the dynamic interactive patterns of complex systems helps gain in-depth understanding of how components interrelate with each other while performing certain functions as a whole. In this study, we present a novel multimodal…

Machine Learning · Computer Science 2019-01-07 Miaolin Fan , Chun-An Chou , Sheng-Che Yen , Yingzi Lin

Complex behaviour in many systems arises from the stochastic interactions of spatially distributed particles or agents. Stochastic reaction-diffusion processes are widely used to model such behaviour in disciplines ranging from biology to…

Statistical Mechanics · Physics 2016-08-23 David Schnoerr , Ramon Grima , Guido Sanguinetti

Despite rapid progress in live-imaging techniques, many complex biophysical and biochemical systems remain only partially observable, thus posing the challenge to identify valid theoretical models and estimate their parameters from an…

Biological Physics · Physics 2023-09-21 George Stepaniants , Alasdair D. Hastewell , Dominic J. Skinner , Jan F. Totz , Jörn Dunkel

In exploring the simulation of human rhythmic perception and synchronization capabilities, this study introduces a computational model inspired by the physical and biological processes underlying rhythm processing. Utilizing a reservoir…

Neurons and Cognition · Quantitative Biology 2025-03-28 Zhongju Yuan , Wannes Van Ransbeeck , Geraint Wiggins , Dick Botteldooren

The dynamics of spatiotemporal patterns in oscillatory reaction-diffusion systems subject to periodic forcing with a spatially random forcing amplitude field are investigated. Quenched disorder is studied using the resonantly forced complex…

Pattern Formation and Solitons · Physics 2009-10-31 C. J. Hemming , R. Kapral

Complex spatiotemporal patterns, called chimera states, consist of coexisting coherent and incoherent domains and can be observed in networks of coupled oscillators. The interplay of synchrony and asynchrony in complex brain networks is an…

Adaptation and Self-Organizing Systems · Physics 2019-06-20 Teresa Chouzouris , Iryna Omelchenko , Anna Zakharova , Jaroslav Hlinka , Premysl Jiruska , Eckehard Schöll

We present a machine-learning method for data-driven synchronization of rhythmic spatiotemporal patterns in reaction-diffusion systems. Based on the phase autoencoder [Yawata {\it et al.}, Chaos {\bf 34}, 063111 (2024)], we map…

Adaptation and Self-Organizing Systems · Physics 2026-01-06 Koichiro Yawata , Ryo Sakuma , Kai Fukami , Kunihiko Taira , Hiroya Nakao

Reservoir Computing has found many potential applications in the field of complex dynamics. In this article, we exploit the exceptional capability of the echo-state network (ESN) model to make it learn a unidirectional coupling scheme from…

Machine Learning · Computer Science 2023-06-21 Swarnendu Mandal , Manish Dev Shrimali

Human brain response is the overall ability of the brain in analyzing internal and external stimuli in the form of transferred energy to the mind/brain phase-space and thus, making the proper decisions. During the last decade scientists…

Analysis of PDEs · Mathematics 2012-04-04 Hamidreza Namazi , Vladimir V. Kulish

This paper considers the problem of data-driven prediction of partially observed systems using a recurrent neural network. While neural network based dynamic predictors perform well with full-state training data, prediction with partial…

Systems and Control · Electrical Eng. & Systems 2023-04-07 Debdipta Goswami

In this paper, the transport phenomena of synaptic electric impulses are considered. The FitzHugh--Nagumo and FitzHugh--Rinzel models appear mathematically appropriate for evaluating these scientific issues. Moreover, applications of such…

Mathematical Physics · Physics 2023-06-13 Monica De Angelis

Hub structure, characterized by a few highly interconnected nodes surrounded by a larger number of nodes with fewer connections, is a prominent topological feature of biological brains, contributing to efficient information transfer and…

Machine Learning · Computer Science 2023-07-06 Zhaoze Wang , Junsong Wang

This study presents an integrated approach to understanding epidemic dynamics through a stochastic spatio-temporal simulation model on a multiplex network, blending physical and informational layers. The physical layer maps the geographic…

Physics and Society · Physics 2025-09-26 H. M. Shadman Tabib , Jaber Ahmed Deedar , K. M. Ariful Kabir

The dynamics of ecological as well as chemical systems may depend on heterogeneous configurations. Heterogeneity in reaction-diffusion systems often increase modelling and simulating difficulties when non-linear effects are present. One…

Physics and Society · Physics 2019-08-27 Orlando Silva

The work concerns the multiscale modeling of a nerve fascicle of myelinated axons. We present a rigorous derivation of a macroscopic bidomain model describing the behavior of the electric potential in the fascicle based on the…

Analysis of PDEs · Mathematics 2022-06-10 Carlos Jerez-Hanckes , Isabel A. Martínez Ávila , Irina Pettersson , Volodymyr Rybalko

We introduce a spatially extended transport kinetic FitzHugh-Nagumo model with forced local interactions and prove that its hydrodynamic limit converges towards the classical nonlocal reaction-diffusion FitzHugh-Nagumo system. Our approach…

Analysis of PDEs · Mathematics 2018-04-12 Joachim Crevat , Grégory Faye , Francis Filbet