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Large neural networks achieve state-of-the-art performance on many tasks, yet their sheer size hinders deployment on resource-constrained devices. Among existing compression approaches, cross-layer parameter sharing remains relatively…

Machine Learning · Computer Science 2026-05-26 Cem Üyük , Mike Lasby , Mohamed Yassin , Utku Evci , Yani Ioannou

Sidechain rotamer libraries of the common amino acids of a protein are useful for folded protein structure determination and for generating ensembles of intrinsically disordered proteins (IDPs). However much of protein function is modulated…

Biological Physics · Physics 2024-05-07 Oufan Zhang , Shubhankar A. Naik , Zi Hao Liu , Julie Forman-Kay , Teresa Head-Gordon

Context-free and context-sensitive formal grammars are often regarded as more appropriate to model proteins than regular level models such as finite state automata and Hidden Markov Models. In theory, the claim is well founded in the fact…

Formal Languages and Automata Theory · Computer Science 2017-01-30 Witold Dyrka , François Coste , Olgierd Unold , Łukasz Culer , Agnieszka Kaczmarek

Assembly code analysis and comprehension play critical roles in applications like reverse engineering, yet they face substantial challenges due to low information density and a lack of explicit syntactic structures. While traditional masked…

Software Engineering · Computer Science 2025-05-23 Xinyi Wang , Jiashui Wang , Jinbo Su , Ke Wang , Peng Chen , Yanming Liu , Long Liu , Xiang Li , Yangdong Wang , Qiyuan Chen , Rongze Chen , Chunfu Jia

Post-training quantization (PTQ) has emerged as a practical approach to compress large neural networks, making them highly efficient for deployment. However, effectively reducing these models to their low-bit counterparts without…

Machine Learning · Computer Science 2024-10-22 Aozhong Zhang , Zi Yang , Naigang Wang , Yingyong Qi , Jack Xin , Xin Li , Penghang Yin

Predictive coding has emerged as an influential normative model of neural computation, with numerous extensions and applications. As such, much effort has been put into mapping PC faithfully onto the cortex, but there are issues that remain…

Neurons and Cognition · Quantitative Biology 2023-03-07 Siavash Golkar , Tiberiu Tesileanu , Yanis Bahroun , Anirvan M. Sengupta , Dmitri B. Chklovskii

Recent papers have introduced a novel approach to explain why a Predictive Process Monitoring (PPM) model for outcome-oriented predictions provides wrong predictions. Moreover, they have shown how to exploit the explanations, obtained using…

Machine Learning · Computer Science 2023-03-28 Williams Rizzi , Chiara Di Francescomarino , Chiara Ghidini , Fabrizio Maria Maggi

Recent researches show that pre-trained models (PTMs) are beneficial to Chinese Word Segmentation (CWS). However, PTMs used in previous works usually adopt language modeling as pre-training tasks, lacking task-specific prior segmentation…

Computation and Language · Computer Science 2021-03-16 Zhen Ke , Liang Shi , Songtao Sun , Erli Meng , Bin Wang , Xipeng Qiu

In spite of the great potential of large language models (LLMs) across various tasks, their deployment on resource-constrained devices remains challenging due to their excessive computational and memory demands. Quantization has emerged as…

Machine Learning · Computer Science 2025-02-28 Hao Mark Chen , Fuwen Tan , Alexandros Kouris , Royson Lee , Hongxiang Fan , Stylianos I. Venieris

Computational prediction of enzyme mechanism and protein function requires accurate physics-based models and suitable sampling. We discuss recent advances in large-scale quantum mechanical (QM) modeling of biochemical systems that have…

Chemical Physics · Physics 2021-05-28 Vyshnavi Vennelakanti , Azadeh Nazemi , Rimsha Mehmood , Adam H. Steeves , Heather J. Kulik

While large language models (LLMs) demonstrate remarkable success in multilingual translation, their internal core translation mechanisms, even at the fundamental word level, remain insufficiently understood. To address this critical gap,…

Computation and Language · Computer Science 2026-01-16 Hongbin Zhang , Kehai Chen , Xuefeng Bai , Xiucheng Li , Yang Xiang , Min Zhang

The neural codec language model (CLM) has demonstrated remarkable performance in text-to-speech (TTS) synthesis. However, troubled by ``recency bias", CLM lacks sufficient attention to coarse-grained information at a higher temporal scale,…

Sound · Computer Science 2024-09-19 Haohan Guo , Fenglong Xie , Dongchao Yang , Xixin Wu , Helen Meng

Prosody contains rich information beyond the literal meaning of words, which is crucial for the intelligibility of speech. Current models still fall short in phrasing and intonation; they not only miss or misplace breaks when synthesizing…

Computation and Language · Computer Science 2024-12-20 Xiangheng He , Junjie Chen , Zixing Zhang , Björn W. Schuller

Neural network-based decoding methods show promise in enhancing error correction performance but face challenges with punctured codes. In particular, existing methods struggle to adapt to variable code rates or meet protocol compatibility…

Machine Learning · Computer Science 2025-10-31 Yongli Yan , Linglong Dai

Code-switching is a data augmentation scheme mixing words from multiple languages into source lingual text. It has achieved considerable generalization performance of cross-lingual transfer tasks by aligning cross-lingual contextual word…

Computation and Language · Computer Science 2024-06-21 Zhuoran Li , Chunming Hu , Junfan Chen , Zhijun Chen , Xiaohui Guo , Richong Zhang

Pre-trained vision-language models are able to interpret visual concepts and language semantics. Prompt learning, a method of constructing prompts for text encoders or image encoders, elicits the potentials of pre-trained models and readily…

Computer Vision and Pattern Recognition · Computer Science 2025-02-21 Zhenhan Huang , Tejaswini Pedapati , Pin-Yu Chen , Jianxi Gao

A recurring pattern in "reasoning without training" is that base LLMs already assign non-trivial probability mass to correct multi-step solutions; the bottleneck is locating these modes efficiently at inference time. Power sampling provides…

Artificial Intelligence · Computer Science 2026-05-13 Tu Nguyen , Matthieu Zimmer , Rasul Tutunov , Xiaotong Ji , Haitham Bou Ammar

Attempts to render deep learning models interpretable, data-efficient, and robust have seen some success through hybridisation with rule-based systems, for example, in Neural Theorem Provers (NTPs). These neuro-symbolic models can induce…

Artificial Intelligence · Computer Science 2020-08-25 Pasquale Minervini , Sebastian Riedel , Pontus Stenetorp , Edward Grefenstette , Tim Rocktäschel

This paper introduces diffusion protein language model (DPLM), a versatile protein language model that demonstrates strong generative and predictive capabilities for protein sequences. We first pre-train scalable DPLMs from…

Machine Learning · Computer Science 2024-10-17 Xinyou Wang , Zaixiang Zheng , Fei Ye , Dongyu Xue , Shujian Huang , Quanquan Gu

Foundation models have revolutionized general-purpose problem-solving, offering rapid task adaptation through pretraining, meta-training, and finetuning. Recent crucial advances in these paradigms reveal the importance of challenging task…

Machine Learning · Computer Science 2025-10-21 Qi Wang , Zehao Xiao , Yixiu Mao , Yun Qu , Jiayi Shen , Yiqin Lv , Xiangyang Ji