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The way in which data are shared can affect their utility and reusability. Here, we demonstrate how data that we had previously shared in bulk can be mobilized further through a knowledge graph that allows for much more granular exploration…

Computational Engineering, Finance, and Science · Computer Science 2025-01-07 Sheeba Samuel , Daniel Mietchen

The broad sharing of research data is widely viewed as of critical importance for the speed, quality, accessibility, and integrity of science. Despite increasing efforts to encourage data sharing, both the quality of shared data, and the…

Digital Libraries · Computer Science 2022-08-30 William Dempsey , Ian Foster , Scott Fraser , Carl Kesselman

Making data compliant with the FAIR Data principles (Findable, Accessible, Interoperable, Reusable) is still a challenge for many researchers, who are not sure which criteria should be met first and how. Illustrated from experimental data…

Other Quantitative Biology · Quantitative Biology 2020-12-18 Daniel Jacob , Romain David , Sophie Aubin , Yves Gibon

With the emerging needs of creating fairness-aware solutions for search and recommendation systems, a daunting challenge exists of evaluating such solutions. While many of the traditional information retrieval (IR) metrics can capture the…

Information Retrieval · Computer Science 2022-03-31 Ruoyuan Gao , Yingqiang Ge , Chirag Shah

The FAIR (Findable, Accessible, Interoperable, and Reusable) data principles [1] promote the interoperability of scientific data by encouraging the use of persistent identifiers, standardized vocabularies, and formal metadata structures.…

Reproducibility is a cornerstone of science. FAIR (findable, accessible, interoperable, and reusable) data is often a vital step towards testing the reproducibility of results. The implementation of FAIR principles in the astrophysical…

Instrumentation and Methods for Astrophysics · Physics 2026-02-10 Susanne Pfalzner , Stephan Hachinger , Jolanta Zjupa , Salvatore Cielo , Frank W. Wagner , Marcus Brüggen , Annika Hagemeier

The rapid evolution of Large Language Models (LLMs) highlights the necessity for ethical considerations and data integrity in AI development, particularly emphasizing the role of FAIR (Findable, Accessible, Interoperable, Reusable) data…

Computation and Language · Computer Science 2024-04-04 Shaina Raza , Shardul Ghuge , Chen Ding , Elham Dolatabadi , Deval Pandya

From a data perspective, the materials mechanics field is characterized by sparsity of available data, mainly due to the strong microstructure-sensitivity of properties like strength, fracture toughness, and fatigue limit. This requires…

Computational Physics · Physics 2024-11-19 Ronak Shoghi , Alexander Hartmaier

This document captures the discussion and deliberation of the FAIR for Research Software (FAIR4RS) subgroup that took a fresh look at the applicability of the FAIR Guiding Principles for scientific data management and stewardship for…

In recent years, digital object management practices to support findability, accessibility, interoperability, and reusability (FAIR) have begun to be adopted across a number of data-intensive scientific disciplines. These digital objects…

High Energy Physics - Experiment · Physics 2022-11-29 Avik Roy

In the rapidly evolving field of bioimaging, the integration and orchestration of Findable, Accessible, Interoperable, and Reusable (FAIR) image analysis workflows remains a challenge. We introduce BIOMERO, a bridge connecting OMERO, a…

Software Engineering · Computer Science 2024-07-26 Torec T. Luik , Rodrigo Rosas-Bertolini , Eric A. J. Reits , Ron A. Hoebe , Przemek M. Krawczyk

The prosperity and lifestyle of our society are very much governed by achievements in condensed matter physics, chemistry and materials science, because new products for sectors such as energy, the environment, health, mobility and…

Scientific data management is at a critical juncture, driven by exponential data growth, increasing cross-domain dependencies, and a severe reproducibility crisis in modern research. Traditional centralized data management approaches are…

Databases · Computer Science 2025-04-30 Sebastian Beyvers , Jannis Hochmuth , Lukas Brehm , Maria Hansen , Alexander Goesmann , Frank Förster

FAIR data presupposes their successful communication between machines and humans while preserving their meaning and reference, requiring all parties involved to share the same background knowledge. Inspired by English as a natural language,…

Databases · Computer Science 2025-04-29 Lars Vogt , Philip Strömert , Nicolas Matentzoglu , Naouel Karam , Marcel Konrad , Manuel Prinz , Roman Baum

Reproducibility is a fundamental requirement of the scientific process since it enables outcomes to be replicated and verified. Computational scientific experiments can benefit from improved reproducibility for many reasons, including…

Databases · Computer Science 2019-09-04 Maria Luiza Mondelli , A. Townsend Peterson , Luiz M. R. Gadelha

The reuse of research software is central to research efficiency and academic exchange. The application of software enables researchers with varied backgrounds to reproduce, validate, and expand upon study findings. Furthermore, the…

In computational science and in computer science, research software is a central asset for research. Computational science is the application of computer science and software engineering principles to solving scientific problems, whereas…

Software Engineering · Computer Science 2019-08-19 Wilhelm Hasselbring , Leslie Carr , Simon Hettrick , Heather Packer , Thanassis Tiropanis

To enable the reusability of massive scientific datasets by humans and machines, researchers aim to adhere to the principles of findability, accessibility, interoperability, and reusability (FAIR) for data and artificial intelligence (AI)…

We present FairX, an open-source Python-based benchmarking tool designed for the comprehensive analysis of models under the umbrella of fairness, utility, and eXplainability (XAI). FairX enables users to train benchmarking bias-mitigation…

Machine Learning · Computer Science 2024-09-04 Md Fahim Sikder , Resmi Ramachandranpillai , Daniel de Leng , Fredrik Heintz

The recomputability and reproducibility of results from scientific software requires access to both the source code and all associated input and output data. However, the full collection of these resources often does not accompany the key…

Computational Engineering, Finance, and Science · Computer Science 2015-12-24 Christian T. Jacobs , Alexandros Avdis , Gerard J. Gorman , Matthew D. Piggott