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We present BioLunar, developed using the Lunar framework, as a tool for supporting biological analyses, with a particular emphasis on molecular-level evidence enrichment for biomarker discovery in oncology. The platform integrates Large…

In an era of exponential scientific growth, identifying novel research ideas is crucial and challenging in academia. Despite potential, the lack of an appropriate benchmark dataset hinders the research of novelty detection. More…

Computation and Language · Computer Science 2025-06-02 Yan Liu , Zonglin Yang , Soujanya Poria , Thanh-Son Nguyen , Erik Cambria

Large Language Models (LLMs) are widely used across various scenarios due to their exceptional reasoning capabilities and natural language understanding. While LLMs demonstrate strong performance in tasks involving mathematics and coding,…

Artificial Intelligence · Computer Science 2025-06-03 Xinyi Liu , Lipeng Ma , Yixuan Li , Weidong Yang , Qingyuan Zhou , Jiayi Song , Shuhao Li , Ben Fei

Materials synthesis is vital for innovations such as energy storage, catalysis, electronics, and biomedical devices. Yet, the process relies heavily on empirical, trial-and-error methods guided by expert intuition. Our work aims to support…

We review discourses about the philosophy of science in qualitative research and evidence from cognitive linguistics in order to ground a framework for discussing the use of Large Language Models (LLMs) to support the qualitative analysis…

Human-Computer Interaction · Computer Science 2024-07-17 James Eschrich , Sarah Sterman

Scientific literature is growing exponentially, creating a critical bottleneck for researchers to efficiently synthesize knowledge. While general-purpose Large Language Models (LLMs) show potential in text processing, they often fail to…

Computation and Language · Computer Science 2025-09-11 Fengyu She , Nan Wang , Hongfei Wu , Ziyi Wan , Jingmian Wang , Chang Wang

Recent years have seen important advances in the building of interpretable models, machine learning models that are designed to be easily understood by humans. In this work, we show that large language models (LLMs) are remarkably good at…

Machine Learning · Computer Science 2024-02-23 Sebastian Bordt , Ben Lengerich , Harsha Nori , Rich Caruana

Large Language Models (LLMs) represent a class of deep learning models adept at understanding natural language and generating coherent responses to various prompts or queries. These models far exceed the complexity of conventional neural…

Machine Learning · Computer Science 2024-12-05 Minghao Shao , Abdul Basit , Ramesh Karri , Muhammad Shafique

Large language models (LLMs) have recently been proposed as general-purpose agents for experimental design, with claims that they can perform in-context experimental design. We evaluate this hypothesis using both open- and closed-source…

Machine Learning · Computer Science 2025-09-29 Rushil Gupta , Jason Hartford , Bang Liu

Analogical reasoning is a core cognitive faculty essential for narrative understanding. While LLMs perform well when surface and structural cues align, they struggle in cases where an analogy is not apparent on the surface but requires…

Computation and Language · Computer Science 2026-04-07 Hope McGovern , Caroline Craig , Thomas Lippincott , Hale Sirin

Large Language Models (LLMs) are known for their remarkable ability to generate synthesized 'knowledge', such as text documents, music, images, etc. However, there is a huge gap between LLM's and human capabilities for understanding…

Computation and Language · Computer Science 2024-08-14 Vladimir Cherkassky , Eng Hock Lee

Explainability for Large Language Models (LLMs) is a critical yet challenging aspect of natural language processing. As LLMs are increasingly integral to diverse applications, their "black-box" nature sparks significant concerns regarding…

Computation and Language · Computer Science 2024-02-23 Haoyan Luo , Lucia Specia

Large Language Models (LLMs) have transformed how people interact with artificial intelligence (AI) systems, achieving state-of-the-art results in various tasks, including scientific discovery and hypothesis generation. However, the lack of…

Computation and Language · Computer Science 2024-11-06 Sikun Guo , Amir Hassan Shariatmadari , Guangzhi Xiong , Albert Huang , Eric Xie , Stefan Bekiranov , Aidong Zhang

With the advent of large language models (LLMs), there is a growing interest in applying LLMs to scientific tasks. In this work, we conduct an experimental study to explore applicability of LLMs for configuring, annotating, translating,…

Human-Computer Interaction · Computer Science 2025-10-13 Orcun Yildiz , Tom Peterka

Large Language Models have taken the cognitive science world by storm. It is perhaps timely now to take stock of the various research paradigms that have been used to make scientific inferences about ``cognition" in these models or about…

Artificial Intelligence · Computer Science 2024-06-17 Desmond C. Ong

Large Language Models (LLMs) have shown remarkable performance in various natural language processing tasks but face challenges in mathematical reasoning, where complex problem-solving requires both linguistic understanding and mathematical…

Computation and Language · Computer Science 2025-03-20 Shuguang Chen , Guang Lin

Large Language Models (LLMs) have demonstrated exceptional performance in general knowledge and reasoning tasks across various domains. However, their effectiveness in specialized scientific fields like Chemical and Biological Engineering…

Artificial Intelligence · Computer Science 2025-05-20 Gaurab Sarkar , Sougata Saha

The era of Large Language Models (LLMs) presents a new opportunity for interpretability--agentic interpretability: a multi-turn conversation with an LLM wherein the LLM proactively assists human understanding by developing and leveraging a…

Artificial Intelligence · Computer Science 2025-06-17 Been Kim , John Hewitt , Neel Nanda , Noah Fiedel , Oyvind Tafjord

Large Language Models (LLMs) and transformer architectures have shown impressive reasoning and generation capabilities across diverse natural language tasks. However, their reliability and robustness in real-world engineering domains remain…

Machine Learning · Computer Science 2025-12-11 Yasaman Esfandiari , Jocelyn Rego , Austin Meyer , Jonathan Gallagher , Mia Levy