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Gene transformer models such as Nucleotide Transformer, DNABert, and LOGO are trained to learn optimal gene sequence representations by using the Masked Language Modeling (MLM) training objective over the complete Human Reference Genome.…

Computation and Language · Computer Science 2024-10-23 Soumyadeep Roy , Shamik Sural , Niloy Ganguly

Prompt tuning and adapter tuning have shown great potential in transferring pre-trained vision-language models (VLMs) to various downstream tasks. In this work, we design a new type of tuning method, termed as regularized mask tuning, which…

Computer Vision and Pattern Recognition · Computer Science 2023-08-08 Kecheng Zheng , Wei Wu , Ruili Feng , Kai Zhu , Jiawei Liu , Deli Zhao , Zheng-Jun Zha , Wei Chen , Yujun Shen

The recent development of Large Language Models (LLMs) has been accompanied by an effervescence of novel ideas and methods to better optimize the loss of deep learning models. Claims from those methods are myriad: from faster convergence to…

Machine Learning · Computer Science 2025-09-03 Andrei Semenov , Matteo Pagliardini , Martin Jaggi

Modern large language models (LLMs) represent a paradigm shift in what can plausibly be expected of machine learning models. The fact that LLMs can effectively generate sensible answers to a diverse range of queries suggests that they would…

Computation and Language · Computer Science 2024-05-27 Dean Wyatte , Fatemeh Tahmasbi , Ming Li , Thomas Markovich

Text representation plays a critical role in tasks like clustering, retrieval, and other downstream applications. With the emergence of large language models (LLMs), there is increasing interest in harnessing their capabilities for this…

Computation and Language · Computer Science 2025-12-25 Yeqin Zhang , Yizheng Zhao , Chen Hu , Binxing Jiao , Daxin Jiang , Ruihang Miao , Cam-Tu Nguyen

Large Language Models (LLMs) have shown promising results on machine translation for high resource language pairs and domains. However, in specialised domains (e.g. medical) LLMs have shown lower performance compared to standard neural…

Computation and Language · Computer Science 2025-07-31 Miguel Rios

We describe our team's contribution to the STRICT-SMALL track of the BabyLM Challenge. The challenge requires training a language model from scratch using only a relatively small training dataset of ten million words. We experiment with…

Computation and Language · Computer Science 2023-11-16 Richard Diehl Martinez , Zebulon Goriely , Hope McGovern , Christopher Davis , Andrew Caines , Paula Buttery , Lisa Beinborn

In this paper, our goal is to generate synthetic data for heterogeneous (mixed-type) tabular datasets with high machine learning utility (MLu). Since the MLu performance depends on accurately approximating the conditional distributions, we…

Machine Learning · Computer Science 2024-08-20 Seunghwan An , Gyeongdong Woo , Jaesung Lim , ChangHyun Kim , Sungchul Hong , Jong-June Jeon

Language models (LMs) have demonstrated remarkable capabilities in NLP, yet adapting them efficiently and robustly to specific tasks remains challenging. As their scale and complexity grow, fine-tuning LMs on labelled data often…

Computation and Language · Computer Science 2025-06-27 Zhengyan Shi

Prior work shows that it is possible to expand pretrained Masked Language Models (MLMs) to new languages by learning a new set of embeddings, while keeping the transformer body frozen. Despite learning a small subset of parameters, this…

Computation and Language · Computer Science 2023-07-06 Kelly Marchisio , Patrick Lewis , Yihong Chen , Mikel Artetxe

Large language models (LLMs) process and predict sequences containing text to answer questions, and address tasks including document summarization, providing recommendations, writing software and solving quantitative problems. We provide a…

Numerical Analysis · Mathematics 2026-02-02 Ricardo Baptista , Andrew Stuart , Son Tran

Subword tokenization is an essential part of modern large language models (LLMs), yet its specific contributions to training efficiency and model performance remain poorly understood. In this work, we decouple the effects of subword…

Computation and Language · Computer Science 2026-05-15 Théo Gigant , Bowen Peng , Jeffrey Quesnelle

Heterogeneous graph neural networks (HGNNs) excel at capturing structural and semantic information in heterogeneous graphs (HGs), while struggling to generalize across domains and tasks. With the rapid advancement of large language models…

Social and Information Networks · Computer Science 2025-07-31 Jinyu Yang , Cheng Yang , Shanyuan Cui , Zeyuan Guo , Liangwei Yang , Muhan Zhang , Zhiqiang Zhang , Chuan Shi

We propose a novel task-agnostic in-domain pre-training method that sits between generic pre-training and fine-tuning. Our approach selectively masks in-domain keywords, i.e., words that provide a compact representation of the target…

Computation and Language · Computer Science 2023-07-17 Shahriar Golchin , Mihai Surdeanu , Nazgol Tavabi , Ata Kiapour

Pre-trained multilingual language models such as mBERT have shown immense gains for several natural language processing (NLP) tasks, especially in the zero-shot cross-lingual setting. Most, if not all, of these pre-trained models rely on…

Computation and Language · Computer Science 2020-10-26 Aditi Chaudhary , Karthik Raman , Krishna Srinivasan , Jiecao Chen

Pre-trained language model (PTM) has been shown to yield powerful text representations for dense passage retrieval task. The Masked Language Modeling (MLM) is a major sub-task of the pre-training process. However, we found that the…

Computation and Language · Computer Science 2022-10-28 Dingkun Long , Yanzhao Zhang , Guangwei Xu , Pengjun Xie

Motivated by the progress made by large language models (LLMs), we introduce the framework of verbalized machine learning (VML). In contrast to conventional machine learning (ML) models that are typically optimized over a continuous…

Machine Learning · Computer Science 2025-02-17 Tim Z. Xiao , Robert Bamler , Bernhard Schölkopf , Weiyang Liu

Cross-modal alignment is essential for vision-language pre-training (VLP) models to learn the correct corresponding information across different modalities. For this purpose, inspired by the success of masked language modeling (MLM) tasks…

Computer Vision and Pattern Recognition · Computer Science 2023-03-28 Yatai Ji , Rongcheng Tu , Jie Jiang , Weijie Kong , Chengfei Cai , Wenzhe Zhao , Hongfa Wang , Yujiu Yang , Wei Liu

Large Language Models (LLMs) have shown remarkable ability in solving complex tasks, making them a promising tool for enhancing tabular learning. However, existing LLM-based methods suffer from high resource requirements, suboptimal…

Machine Learning · Computer Science 2025-05-12 Ruxue Shi , Hengrui Gu , Xu Shen , Xin Wang

Recent advances in Large Language Models (LLMs) have opened new perspectives for automation in optimization. While several studies have explored how LLMs can generate or solve optimization models, far less is understood about what these…

Artificial Intelligence · Computer Science 2025-12-16 Francesca Da Ros , Luca Di Gaspero , Kevin Roitero
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