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The hippocampus supports spatial navigation by encoding cognitive maps through collective place cell activity. We model the place cell population as non-negative spatial embeddings derived from the spectral decomposition of multi-step…

Neurons and Cognition · Quantitative Biology 2025-10-28 Minglu Zhao , Dehong Xu , Deqian Kong , Wen-Hao Zhang , Ying Nian Wu

We take the testing perspective to understand what the minimal discrimination time between two stimuli is for different types of rate coding neurons. Our main goal is to describe the testing abilities of two different encoding systems:…

Statistics Theory · Mathematics 2024-02-14 Guilherme Ost , Patricia Reynaud-Bouret

Networks of neurons in some brain areas are flexible enough to encode new memories quickly. Using a standard firing rate model of recurrent networks, we develop a theory of flexible memory networks. Our main results characterize networks…

Neurons and Cognition · Quantitative Biology 2015-02-25 Carina Curto , Anda Degeratu , Vladimir Itskov

A neural code on $ n $ neurons is a collection of subsets of the set $ [n]=\{1,2,\dots,n\} $. In this paper, we study some properties of graphs of neural codes. In particular, we study codeword containment graph (CCG) given by Chan et al.…

Combinatorics · Mathematics 2024-03-27 Suhith K N , Neha Gupta

We solve a long-standing open problem about the optimal codebook structure of codes in $n$-dimensional Euclidean space that consist of $n+1$ codewords subject to a codeword energy constraint, in terms of minimizing the average decoding…

Information Theory · Computer Science 2023-11-14 Adriano Pastore

Convolutional networks are ubiquitous in deep learning. They are particularly useful for images, as they reduce the number of parameters, reduce training time, and increase accuracy. However, as a model of the brain they are seriously…

Machine Learning · Computer Science 2022-01-19 Roman Pogodin , Yash Mehta , Timothy P. Lillicrap , Peter E. Latham

Constrained Optimization solution algorithms are restricted to point based solutions. In practice, single or multiple objectives must be satisfied, wherein both the objective function and constraints can be non-convex resulting in multiple…

Neural and Evolutionary Computing · Computer Science 2021-01-05 Gurpreet Singh , Soumyajit Gupta , Matthew Lease

This paper concerns non-overlapping codes, block codes motivated by synchronisation and DNA-based storage applications. Most existing constructions of these codes do not account for the restrictions posed by the physical properties of…

Information Theory · Computer Science 2025-02-05 Lidija Stanovnik , Miha Moškon , Miha Mraz

When a neuron breaks silence, it can emit action potentials in a number of patterns. Some responses are so sudden and intense that electrophysiologists felt the need to single them out, labeling action potentials emitted at a particularly…

Neurons and Cognition · Quantitative Biology 2023-02-15 Richard Naud , Zachary Friedenberger , Katalin Toth

A combinatorial code $\mathcal{C}$ is a collection of subsets of $[n]$, or equivalently a set of points in $\{0,1\}^n$. A morphism of codes is a map from one combinatorial code to another such that the coordinates of points in the image can…

Combinatorics · Mathematics 2026-03-12 Juliann Geraci , Alexander B. Kunin , Alexandra Seceleanu

Encoding the distance between locations in space is essential for accurate navigation. Grid cells, a functional class of neurons in medial entorhinal cortex, are believed to support this computation. However, existing theories of how…

Neurons and Cognition · Quantitative Biology 2025-11-12 Pritipriya Dasbehera , Akshunna S. Dogra , William T. Redman

Neurons in the brain represent external stimuli via neural codes. These codes often arise from stimulus-response maps, associating to each neuron a convex receptive field. An important problem confronted by the brain is to infer properties…

Neurons and Cognition · Quantitative Biology 2014-09-10 Nora Youngs

Soft-thresholding has been widely used in neural networks. Its basic network structure is a two-layer convolution neural network with soft-thresholding. Due to the network's nature of nonlinearity and nonconvexity, the training process…

Machine Learning · Computer Science 2023-04-17 Chunyan Xiong , Mengli Lu , Xiaotong Yu , Jian Cao , Zhong Chen , Di Guo , Xiaobo Qu

Convexity properties of error rates of a class of decoders, including the ML/min-distance one as a special case, are studied for arbitrary constellations, bit mapping and coding. Earlier results obtained for the AWGN channel are extended to…

Information Theory · Computer Science 2016-11-15 Sergey Loyka , Victoria Kostina , Francois Gagnon

Current work on human-machine alignment aims at understanding machine-learned latent spaces and their correspondence to human representations. G{\"a}rdenfors' conceptual spaces is a prominent framework for understanding human…

Neurons and networks in the cerebral cortex must operate reliably despite multiple sources of noise. To evaluate the impact of both input and output noise, we determine the robustness of single-neuron stimulus selective responses, as well…

Neurons and Cognition · Quantitative Biology 2018-01-24 Ran Rubin , L. F. Abbott , Haim Sompolinsky

Volumetric brain reconstructions provide an unprecedented opportunity to gain insights into the complex connectivity patterns of neurons in an increasing number of organisms. Here, we model and quantify the complexity of the resulting…

Neurons and Cognition · Quantitative Biology 2024-05-13 Anastasiya Salova , István A. Kovács

Neural codes are collections of binary vectors that represent the firing patterns of neurons. The information given by a neural code $C$ can be represented by its neural ideal $J_C$. In turn, the polynomials in $J_C$ can be used to…

Commutative Algebra · Mathematics 2018-03-09 Angelique Morvant

Grid cells in the medial entorhinal cortex and place cells in the hippocampus together support spatial navigation. The two regions are reciprocally connected, and there is a chicken-and-egg problem for how both arise and reinforce each…

Neurons and Cognition · Quantitative Biology 2026-05-21 Zhaoze Wang , Genela Morris , Dori Derdikman , Pratik Chaudhari , Vijay Balasubramanian

Predictive coding has emerged as an influential normative model of neural computation, with numerous extensions and applications. As such, much effort has been put into mapping PC faithfully onto the cortex, but there are issues that remain…

Neurons and Cognition · Quantitative Biology 2023-03-07 Siavash Golkar , Tiberiu Tesileanu , Yanis Bahroun , Anirvan M. Sengupta , Dmitri B. Chklovskii