Related papers: Tight Lower Bounds for Central String Queries in C…
Given a sequence of integers, we want to find a longest increasing subsequence of the sequence. It is known that this problem can be solved in $O(n \log n)$ time and space. Our goal in this paper is to reduce the space consumption while…
The suffix array is a fundamental data structure for many applications that involve string searching and data compression. Designing time/space-efficient suffix array construction algorithms has attracted significant attention and…
We solve an open problem related to an optimal encoding of a straight line program (SLP), a canonical form of grammar compression deriving a single string deterministically. We show that an information-theoretic lower bound for representing…
Search applications often display shortened sentences which must contain certain query terms and must fit within the space constraints of a user interface. This work introduces a new transition-based sentence compression technique developed…
A lattice is a partially-ordered set in which every pair of elements has a unique meet (greatest lower bound) and join (least upper bound). We present new data structures for lattices that are simple, efficient, and nearly optimal in terms…
We develop dynamic dictionaries on the word RAM that use asymptotically optimal space, up to constant factors, subject to insertions and deletions, and subject to supporting perfect-hashing queries and/or membership queries, each operation…
We show that the Longest Common Prefix Array of a text collection of total size n on alphabet [1, {\sigma}] can be computed from the Burrows-Wheeler transformed collection in O(n log {\sigma}) time using o(n log {\sigma}) bits of working…
The Gap-Hamming-Distance problem arose in the context of proving space lower bounds for a number of key problems in the data stream model. In this problem, Alice and Bob have to decide whether the Hamming distance between their $n$-bit…
Given an increasing sequence of integers $x_1,\ldots,x_n$ from a universe $\{0,\ldots,u-1\}$, the monotone minimal perfect hash function (MMPHF) for this sequence is a data structure that answers the following rank queries: $rank(x) = i$ if…
Internal Pattern Matching (IPM) queries on a text $T$, given two fragments $X$ and $Y$ of $T$ such that $|Y|<2|X|$, ask to compute all exact occurrences of $X$ within $Y$. IPM queries have been introduced by Kociumaka, Radoszewski, Rytter,…
Most state-of-the-art satisfiability algorithms today are variants of the DPLL procedure augmented with clause learning. The main bottleneck for such algorithms, other than the obvious one of time, is the amount of memory used. In the field…
Given an $n$-bit array $A$, the succinct rank data structure problem asks to construct a data structure using space $n+r$ bits for $r\ll n$, supporting rank queries of form $\mathtt{rank}(x)=\sum_{i=0}^{x-1} A[i]$. In this paper, we design…
Spaced seeds are important tools for similarity search in bioinformatics, and using several seeds together often significantly improves their performance. With existing approaches, however, for each seed we keep a separate linear-size data…
We revisit the range $\tau$-majority problem, which asks us to preprocess an array $A[1..n]$ for a fixed value of $\tau \in (0,1/2]$, such that for any query range $[i,j]$ we can return a position in $A$ of each distinct $\tau$-majority…
Given an array A of $n$ elements, we wish to support queries for the most frequent and least frequent element in a subrange $[l, r]$ of $A$. We also wish to support updates that change a particular element at index $i$ or insert/ delete an…
It has been shown in the indexing literature that there is an essential difference between prefix/range searches on the one hand, and predecessor/rank searches on the other hand, in that the former provably allows faster query resolution.…
We present a new threshold phenomenon in data structure lower bounds where slightly reduced update times lead to exploding query times. Consider incremental connectivity, letting t_u be the time to insert an edge and t_q be the query time.…
The Karp-Rabin fingerprint of a string is a type of hash value that due to its strong properties has been used in many string algorithms. In this paper we show how to construct a data structure for a string $S$ of size $N$ compressed by a…
It is shown that for a given ordered node-labelled tree of size $n$ and with $s$ many different node labels, one can construct in linear time a top dag of height $O(\log n)$ and size $O(n / \log_\sigma n) \cap O(d \cdot \log n)$, where…
We study variable time search, a form of quantum search where queries to different items take different time. Our first result is a new quantum algorithm that performs variable time search with complexity $O(\sqrt{T}\log n)$ where…