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Tandem mass spectrometry provides a high-throughput framework for identifying and quantifying proteins in complex biological samples. In computational proteomics, predicting peptide MS/MS spectra is a critical task, enabling downstream…
Automating data extraction from full-text randomised controlled trials (RCTs) for meta-analysis remains a significant challenge. This study evaluates the practical performance of three LLMs (Gemini-2.0-flash, Grok-3, GPT-4o-mini) across…
The project, under industrial funding, presented in this publication aims at the semantic analysis of a normative document describing requirements applicable to electrical appliances. The objective of the project is to build a semantic…
Large Language Models (LLMs) have demonstrated remarkable capabilities across various domains, including software development, education, and technical assistance. Among these, software development is one of the key areas where LLMs are…
Detecting evidence within the context is a key step in the process of reasoning task. Evaluating and enhancing the capabilities of LLMs in evidence detection will strengthen context-based reasoning performance. This paper proposes a…
With the exponential growth of cyber-physical systems (CPS), new security challenges have emerged. Various vulnerabilities, threats, attacks, and controls have been introduced for the new generation of CPS. However, there lack a systematic…
The automatic extraction of structure from text can be difficult for machines. Yet, the elicitation of this information can provide many benefits and opportunities for various applications. Benefits have also been identified for the area of…
The advent of powerful neural classifiers has increased interest in problems that require both learning and reasoning. These problems are critical for understanding important properties of models, such as trustworthiness, generalization,…
There is an increasing body of work using Large Language Models (LLMs) as agents for orchestrating workflows and making decisions in domains that require planning and multi-step reasoning. As a result, it is imperative to evaluate LLMs on…
Software plays a crucial role in our daily lives, and therefore the quality and security of software systems have become increasingly important. However, vulnerabilities in software still pose a significant threat, as they can have serious…
BigBench is the new standard (TPCx-BB) for benchmarking and testing Big Data systems. The TPCx-BB specification describes several business use cases -- queries -- which require a broad combination of data extraction techniques including…
We introduce DRBench, a benchmark for evaluating AI agents on complex, open-ended deep research tasks in enterprise settings. Unlike prior benchmarks that focus on simple questions or web-only queries, DRBench evaluates agents on multi-step…
Machine Reading Comprehension (MRC) poses a significant challenge in the field of Natural Language Processing (NLP). While mainstream MRC methods predominantly leverage extractive strategies using encoder-only models such as BERT,…
Cyber-Physical Systems (CPS) are being widely adopted in critical infrastructures, such as smart grids, nuclear plants, water systems, transportation systems, manufacturing and healthcare services, among others. However, the increasing…
Industrial cyber-physical systems require complex distributed software to orchestrate many heterogeneous mechatronic components and control multiple physical processes. Industrial automation software is typically developed in a model-driven…
Code search has usually been evaluated as first-stage retrieval, even though production systems rely on broader pipelines with reranking and developer-style queries. Existing benchmarks also suffer from data contamination, label noise, and…
Existing retrieval benchmarks primarily consist of information-seeking queries (e.g., aggregated questions from search engines) where keyword or semantic-based retrieval is usually sufficient. However, many complex real-world queries…
Process Mining is established in research and industry systems to analyze and optimize processes based on event data from information systems. Within this work, we accomodate process mining techniques to Cyber-Physical Systems. To capture…
Today's cyber physical systems (CPS) are not well protected against cyber attacks. Protected CPS often have holes in their defense, due to the manual nature of today's cyber security design process. It is necessary to automate or…
Recent advancements in Large Language Models (LLMs) have markedly enhanced the interpretation and processing of tabular data, introducing previously unimaginable capabilities. Despite these achievements, LLMs still encounter significant…