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Many real-world networks have associated metadata that assigns categorical labels to nodes. Analysis of these annotations can complement the topological analysis of complex networks. Annotated networks have typically been used to evaluate…

Social and Information Networks · Computer Science 2025-05-30 Sung Soo Moon , Sebastian E. Ahnert

As interconnected systems proliferate, safeguarding complex infrastructures against an escalating array of cyber threats has become an urgent challenge. The increasing number of vulnerabilities, combined with resource constraints, makes…

Cryptography and Security · Computer Science 2025-02-18 Yuning Jiang , Nay Oo , Qiaoran Meng , Hoon Wei Lim , Biplab Sikdar

Networks play a prominent role in the study of complex systems of interacting entities in biology, sociology, and economics. Despite this diversity, we demonstrate here that a statistical model decomposing networks into matching and…

Physics and Society · Physics 2016-02-05 Rudolf P. Rohr , Russel E. Naisbit , Christian Mazza , Louix-Félix Bersier

Accurate ranking of important features is a fundamental challenge in interpretable machine learning with critical applications in scientific discovery and decision-making. Unlike feature selection and feature importance, the specific…

Machine Learning · Computer Science 2025-09-22 Yuxi Chen , Tiffany Tang , Genevera Allen

Networks have in recent years emerged as an invaluable tool for describing and quantifying complex systems in many branches of science. Recent studies suggest that networks often exhibit hierarchical organization, where vertices divide into…

Machine Learning · Statistics 2008-11-05 Aaron Clauset , Cristopher Moore , M. E. J. Newman

Network representations of systems from various scientific and societal domains are neither completely random nor fully regular, but instead appear to contain recurring structural building blocks. These features tend to be shared by…

Social and Information Networks · Computer Science 2016-10-20 Ian Barnett , Nishant Malik , Marieke L. Kuijjer , Peter J. Mucha , Jukka-Pekka Onnela

Information on the structure of molecules, retrieved via biochemical databases, plays a pivotal role in various disciplines, such as metabolomics, systems biology, and drug discovery. However, no such database can be complete, and the…

Biomolecules · Quantitative Biology 2023-08-25 Casper Asbjørn Eriksen , Jakob Lykke Andersen , Rolf Fagerberg , Daniel Merkle

A large number of complex systems find a natural abstraction in the form of weighted networks whose nodes represent the elements of the system and the weighted edges identify the presence of an interaction and its relative strength. In…

Physics and Society · Physics 2009-04-23 M. Angeles Serrano , Marian Boguna , Alessandro Vespignani

The ability to compare complex systems can provide new insight into the fundamental nature of the processes captured in ways that are otherwise inaccessible to observation. Here, we introduce the $n$-tangle method to directly compare two…

Physics and Society · Physics 2014-11-27 Lazaros K. Gallos , Nina H. Fefferman

In this paper, we first extend the celebrated PageRank modification to a higher-order Markov chain. Although this system has attractive theoretical properties, it is computationally intractable for many interesting problems. We next study a…

Numerical Analysis · Computer Science 2015-11-13 David F. Gleich , Lek-Heng Lim , Yongyang Yu

Random networks are a powerful tool in the analytical modeling of complex networks as they allow us to write approximate mathematical models for diverse properties and behaviors of networks. One notable shortcoming of these models is that…

Physics and Society · Physics 2023-07-10 Laurent Hébert-Dufresne , Márton Pósfai , Antoine Allard

One of the most central questions in network science is: which nodes are most important? Often this question is answered using structural properties such as high connectedness or centrality in the network. However, static structural…

Physics and Society · Physics 2021-07-02 Casper van Elteren , Rick Quax , Peter Sloot

Understanding the structure and dynamics of biological networks is one of the important challenges in system biology. In addition, increasing amount of experimental data in biological networks necessitate the use of efficient methods to…

Artificial Intelligence · Computer Science 2012-07-17 Mohammadreza Keyvanpour , Fereshteh Azizani

Link prediction is one of the fundamental problems in computational social science. A particularly common means to predict existence of unobserved links is via structural similarity metrics, such as the number of common neighbors; node…

Social and Information Networks · Computer Science 2019-01-01 Kai Zhou , Tomasz P. Michalak , Talal Rahwan , Marcin Waniek , Yevgeniy Vorobeychik

Algorithmic decisions often result in scoring and ranking individuals to determine credit worthiness, qualifications for college admissions and employment, and compatibility as dating partners. While automatic and seemingly objective,…

Computers and Society · Computer Science 2018-04-24 Ke Yang , Julia Stoyanovich , Abolfazl Asudeh , Bill Howe , HV Jagadish , Gerome Miklau

A variety of metrics have been proposed to measure the relative importance of nodes in a network. One of these, alpha-centrality [Bonacich, 2001], measures the number of attenuated paths that exist between nodes. We introduce a normalized…

Social and Information Networks · Computer Science 2012-08-06 Rumi Ghosh , Kristina Lerman

Network node embedding is an active research subfield of complex network analysis. This paper contributes a novel approach to learning network node embeddings and direct node classification using a node ranking scheme coupled with an…

Machine Learning · Computer Science 2021-09-14 Blaž Škrlj , Jan Kralj , Janez Konc , Marko Robnik-Šikonja , Nada Lavrač

Several social, medical, engineering and biological challenges rely on discovering the functionality of networks from their structure and node metadata, when it is available. For example, in chemoinformatics one might want to detect whether…

Machine Learning · Computer Science 2018-11-26 Leonardo Gutierrez Gomez , Jean-Charles Delvenne

Higher-order networks are efficient representations of sequential data. Unlike the classic first-order network approach, they capture indirect dependencies between items composing the input sequences by the use of \textit{memory-nodes}. We…

Physics and Society · Physics 2021-09-08 Célestin Coquidé , Julie Queiros , François Queyroi

Feature selection is important in data representation and intelligent diagnosis. Elastic net is one of the most widely used feature selectors. However, the features selected are dependant on the training data, and their weights dedicated…

Machine Learning · Computer Science 2021-01-01 Shaode Yu , Haobo Chen , Hang Yu , Zhicheng Zhang , Xiaokun Liang , Wenjian Qin , Yaoqin Xie , Ping Shi