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One of the most important magnetic spin structure is the topologically stabilised skyrmion quasi-particle. Its interesting physical properties make them candidates for memory and efficient neuromorphic computation schemes. For the device…

Machine Learning · Computer Science 2023-03-31 Isaac Labrie-Boulay , Thomas Brian Winkler , Daniel Franzen , Alena Romanova , Hans Fangohr , Mathias Kläui

MRI-guided High Intensity Focused Ultrasound (MRI-HIFU) is a promising method for the non-invasive ablation of pathological tissue in many organs, including mobile organs such as liver and kidney. The possibility to locally deposit thermal…

Medical Physics · Physics 2020-12-01 Baudouin Denis de Senneville , Chrit Moonen , Mario Ries

Accurate 3D reconstruction of vertebral anatomy from ultrasound is important for guiding minimally invasive spine interventions, but it remains challenging due to acoustic shadowing and view-dependent signal variations. We propose an…

Computer Vision and Pattern Recognition · Computer Science 2026-03-10 Magdalena Wysocki , Kadir Burak Buldu , Miruna-Alexandra Gafencu , Mohammad Farid Azampour , Nassir Navab

Currently, the Morpho-Constitutional Analysis (MCA) is the de facto approach for the etiological diagnosis of kidney stone formation, and it is an important step for establishing personalized treatment to avoid relapses. More recently,…

Intraoperative navigation in spine surgery demands millimeter-level accuracy. Currently, this is achieved through radiation-intensive intraoperative imaging and bone-anchored markers that are invasive and disrupt surgical workflow.…

Computer Vision and Pattern Recognition · Computer Science 2026-05-21 Lorenzo Pettinari , Sidaty El Hadramy , Michael Wehrli , Philippe C. Cattin , Daniel Studer , Carol C. Hasler , Maria Licci

We present an error-controlled mesh refinement procedure for needle insertion simulation and apply it to the simulation of electrode implantation for deep brain stimulation, including brain shift. Our approach enables to control the error…

Computational Engineering, Finance, and Science · Computer Science 2018-11-20 Huu Phuoc Bui , Satyendra Tomar , Hadrien Courtecuisse , Michel Audette , Stéphane Cotin , Stéphane P. A. Bordas

Labeling vertebral discs from MRI scans is important for the proper diagnosis of spinal related diseases, including multiple sclerosis, amyotrophic lateral sclerosis, degenerative cervical myelopathy and cancer. Automatic labeling of the…

Image and Video Processing · Electrical Eng. & Systems 2021-08-29 Reza Azad , Lucas Rouhier , Julien Cohen-Adad

In recent years, non-invasive neuro-modulation methods such as Focused Ultrasound (FUS) have gained popularity. The aim of this work is to introduce the use of existing open-source technology for surgical navigation to the field of…

Medical Physics · Physics 2019-09-30 Frank Preiswerk , Spencer T. Brinker , Nathan J. McDannold , Timothy Y. Mariano

Diffusion-weighted magnetic resonance imaging (DW-MRI) can be used to characterise the microstructure of the nervous tissue, e.g. to delineate brain white matter connections in a non-invasive manner via fibre tracking. Magnetic Resonance…

Deformable image registration is a fundamental task in medical imaging. Due to the large computational complexity of deformable registration of volumetric images, conventional iterative methods usually face the tradeoff between the…

Computer Vision and Pattern Recognition · Computer Science 2022-01-19 Kaicong Sun , Sven Simon

Multiple sclerosis (MS) is a chronic inflammatory and degenerative disease of the central nervous system, characterized by the appearance of focal lesions in the white and gray matter that topographically correlate with an individual…

Computer Vision and Pattern Recognition · Computer Science 2022-01-31 Yang Ma , Chaoyi Zhang , Mariano Cabezas , Yang Song , Zihao Tang , Dongnan Liu , Weidong Cai , Michael Barnett , Chenyu Wang

Segmenting a moving needle in ultrasound images is challenging due to the presence of artifacts, noise, and needle occlusion. This task becomes even more demanding in scenarios where data availability is limited. In this paper, we present a…

Image and Video Processing · Electrical Eng. & Systems 2025-09-30 Raghavv Goel , Cecilia Morales , Manpreet Singh , Artur Dubrawski , John Galeotti , Howie Choset

While virtual-reality (VR) has shown great promise in radiological tasks, effective user-interaction strategies that can improve efficiency and ergonomics are still under-explored and systematic evaluations of VR interaction techniques in…

Human-Computer Interaction · Computer Science 2022-12-20 Owen Hellum , Marta Kersten-Oertel , Yiming Xiao

Purpose: This proof-of-concept study evaluates feasibility and accuracy of an ultrasound-based navigation system for open liver surgery. Unlike most conventional systems that rely on registration to preoperative imaging, the proposed system…

Image and Video Processing · Electrical Eng. & Systems 2025-11-03 Karin Olthof , Theo Ruers , Tiziano Natali , Lisanne Venix , Jasper Smit , Anne den Hartor , Niels Kok , Matteo Fusaglia , Koert Kuhlmann

Background: Automated segmentation of spinal MR images plays a vital role both scientifically and clinically. However, accurately delineating posterior spine structures presents challenges. Methods: This retrospective study, approved by the…

Image-based navigation is widely considered the next frontier of minimally invasive surgery. It is believed that image-based navigation will increase the access to reproducible, safe, and high-precision surgery as it may then be performed…

Computer Vision and Pattern Recognition · Computer Science 2021-08-06 Mathias Unberath , Cong Gao , Yicheng Hu , Max Judish , Russell H Taylor , Mehran Armand , Robert Grupp

There is an unmet clinical need for developing novel methods to complement and replace the current radiation-emitting imaging-based methods for the detection of loose pedicle screws as a complication after spinal fusion surgery which fail…

Spatially-varying intensity noise is a common source of distortion in medical images. Bias field noise is one example of such a distortion that is often present in the magnetic resonance (MR) images or other modalities such as retina…

Computer Vision and Pattern Recognition · Computer Science 2020-06-18 Reza Abbasi-Asl , Aboozar Ghaffari , Emad Fatemizadeh

Surgical navigation based on multimodal image registration has played a significant role in providing intraoperative guidance to surgeons by showing the relative position of the target area to critical anatomical structures during surgery.…

Computer Vision and Pattern Recognition · Computer Science 2026-02-17 Jiazheng Wang , Zeyu Liu , Min Liu , Xiang Chen , Xinyao Yu , Yaonan Wang , Hang Zhang

Acoustic-resolution photoacoustic microscopy (AR-PAM) is a promising tool for microvascular imaging. In the focal region, resolution of AR-PAM is determined by the ultrasound transducer and ultimately limited by acoustic diffraction. In the…

Image and Video Processing · Electrical Eng. & Systems 2021-11-22 Fei Feng , Siqi Liang , Sung-Liang Chen