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General graphs are difficult for learning due to their irregular structures. Existing works employ message passing along graph edges to extract local patterns using customized graph kernels, but few of them are effective for the integration…

Computer Vision and Pattern Recognition · Computer Science 2020-07-23 Yecheng Lyu , Ming Li , Xinming Huang , Ulkuhan Guler , Patrick Schaumont , Ziming Zhang

We propose a transformer architecture and training strategy for tree generation. The architecture processes data at multiple resolutions and has an hourglass shape, with middle layers processing fewer tokens than outer layers. Similar to…

Computer Vision and Pattern Recognition · Computer Science 2025-02-10 Hanxiao Wang , Biao Zhang , Jonathan Klein , Dominik L. Michels , Dongming Yan , Peter Wonka

Structural reconstruction of plant roots from MRI is challenging, because of low resolution and low signal-to-noise ratio of the 3D measurements which may lead to disconnectivities and wrongly connected roots. We propose a two-stage…

Computer Vision and Pattern Recognition · Computer Science 2020-10-28 Jannis Horn , Yi Zhao , Nils Wandel , Magdalena Landl , Andrea Schnepf , Sven Behnke

Geometric trees are characterized by their tree-structured layout and spatially constrained nodes and edges, which significantly impacts their topological attributes. This inherent hierarchical structure plays a crucial role in domains such…

Machine Learning · Computer Science 2024-08-19 Zheng Zhang , Allen Zhang , Ruth Nelson , Giorgio Ascoli , Liang Zhao

Accurate estimation of plant skeletal structure (e.g., branching structure) from images is essential for smart agriculture and plant science. Unlike human skeletons with fixed topology, plant skeleton estimation presents a unique challenge,…

Computer Vision and Pattern Recognition · Computer Science 2024-11-26 Xinpeng Liu , Hiroaki Santo , Yosuke Toda , Fumio Okura

Structural information of phylogenetic tree topologies plays an important role in phylogenetic inference. However, finding appropriate topological structures for specific phylogenetic inference tasks often requires significant design effort…

Machine Learning · Statistics 2023-02-20 Cheng Zhang

The connection of edges in a graph generates a structure that is independent of a coordinate system. This visual metaphor allows creating a more flexible representation of data than a two-dimensional scatterplot. In this work, we present…

Graphics · Computer Science 2019-07-15 Daniel Alcaide , Jan Aerts

Ridge surfaces represent important features for the analysis of 3-dimensional (3D) datasets in diverse applications and are often derived from varying underlying data including flow fields, geological fault data, and point data, but they…

Computer Vision and Pattern Recognition · Computer Science 2023-08-15 Nicolas Klenert , Verena Lepper , Daniel Baum

Scene understanding requires the extraction and representation of scene components together with their properties and inter-relations. We describe a model in which meaningful scene structures are extracted from the image by an iterative…

Computer Vision and Pattern Recognition · Computer Science 2021-05-13 Shimon Ullman , Liav Assif , Alona Strugatski , Ben-Zion Vatashsky , Hila Levy , Aviv Netanyahu , Adam Yaari

Tree kernels have demonstrated their ability to deal with hierarchical data, as the intrinsic tree structure often plays a discriminative role. While such kernels have been successfully applied to various domains such as nature language…

Computer Vision and Pattern Recognition · Computer Science 2016-04-08 Yanwei Cui , Laetitia Chapel , Sébastien Lefèvre

Dynamic programming on tree decompositions is a frequently used approach to solve otherwise intractable problems on instances of small treewidth. In recent work by Bodlaender et al., it was shown that for many connectivity problems, there…

Data Structures and Algorithms · Computer Science 2013-06-03 Stefan Fafianie , Hans L. Bodlaender , Jesper Nederlof

We propose a novel tree-like curvilinear structure reconstruction algorithm based on supervised learning and graph theory. In this work we analyze image patches to obtain the local major orientations and the rankings that correspond to the…

Computer Vision and Pattern Recognition · Computer Science 2016-12-09 Seong-Gyun Jeong , Yuliya Tarabalka , Nicolas Nisse , Josiane Zerubia

In this paper, we present an exact algorithm for the Steiner tree problem. The algorithm is based on certain pre-computed index structures. Our algorithm offers a practical solution for the Steiner tree problems on graphs of large size and…

Data Structures and Algorithms · Computer Science 2013-05-27 Fang Wei-Kleiner

Rectangular layouts, subdivisions of an outer rectangle into smaller rectangles, have many applications in visualizing spatial information, for instance in rectangular cartograms in which the rectangles represent geographic or political…

Computational Geometry · Computer Science 2016-08-12 Kevin Buchin , David Eppstein , Maarten Löffler , Martin Nöllenburg , Rodrigo I. Silveira

Natural and man-made transport webs are frequently dominated by dense sets of nested cycles. The architecture of these networks, as defined by the topology and edge weights, determines how efficiently the networks perform their function.…

Quantitative Methods · Quantitative Biology 2016-07-27 Carl D. Modes , Marcelo O. Magnasco , Eleni Katifori

Modeling the distribution of high dimensional data by a latent tree graphical model is a prevalent approach in multiple scientific domains. A common task is to infer the underlying tree structure, given only observations of its terminal…

Machine Learning · Statistics 2021-12-08 Yariv Aizenbud , Ariel Jaffe , Meng Wang , Amber Hu , Noah Amsel , Boaz Nadler , Joseph T. Chang , Yuval Kluger

Procedural terrain generation is the process of generating a digital representation of terrain using a computer program or procedure, with little to no human guidance. This paper proposes a procedural terrain generation algorithm based on a…

Graphics · Computer Science 2022-10-27 Fong Yuan Lim , Yu Wei Tan , Anand Bhojan

Spanning trees are an important primitive in many data analysis tasks, when a data set needs to be summarized in terms of its "skeleton", or when a tree-shaped graph over all observations is required for downstream processing. Popular…

Discrete Mathematics · Computer Science 2024-04-10 Enrique Fita Sanmartín , Christoph Schnörr , Fred A. Hamprecht

Plants frequently contain numerous organs, organized in 3D branching systems defining the plant's architecture. Reconstructing the architecture of plants from unstructured observations is challenging because of self-occlusion and spatial…

Computer Vision and Pattern Recognition · Computer Science 2026-04-02 Samara Ghrer , Christophe Godin , Stefanie Wuhrer

Extracting information from tables in documents presents a significant challenge in many industries and in academic research. Existing methods which take a bottom-up approach of integrating lines into cells and rows or columns neglect the…

Neural and Evolutionary Computing · Computer Science 2019-04-04 Nataliya Le Vine , Matthew Zeigenfuse , Mark Rowan