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With growing emphasis on personalized cancer-therapies,radiogenomics has shown promise in identifying target tumor mutational status on routine imaging (i.e. MRI) scans. These approaches fall into 2 categories: (1) deep-learning/radiomics…

Global effective receptive field plays a crucial role for image style transfer (ST) to obtain high-quality stylized results. However, existing ST backbones (e.g., CNNs and Transformers) suffer huge computational complexity to achieve global…

Computer Vision and Pattern Recognition · Computer Science 2025-03-21 Hongda Liu , Longguang Wang , Ye Zhang , Ziru Yu , Yulan Guo

Spatial Transcriptomics (ST) technologies provide biologists with rich insights into single-cell biology by preserving spatial context of cells. Building foundational models for ST can significantly enhance the analysis of vast and complex…

Genomics · Quantitative Biology 2025-07-24 Suyuan Zhao , Yizhen Luo , Ganbo Yang , Yan Zhong , Hao Zhou , Zaiqing Nie

Masked Image Modeling (MIM) is a promising self-supervised learning approach that enables learning from unlabeled images. Despite its recent success, learning good representations through MIM remains challenging because it requires…

Computer Vision and Pattern Recognition · Computer Science 2024-02-28 Amir Bar , Florian Bordes , Assaf Shocher , Mahmoud Assran , Pascal Vincent , Nicolas Ballas , Trevor Darrell , Amir Globerson , Yann LeCun

Prompt learning has emerged as a promising paradigm for adapting pre-trained vision-language models (VLMs) to few-shot whole slide image (WSI) classification by aligning visual features with textual representations, thereby reducing…

Computer Vision and Pattern Recognition · Computer Science 2025-10-01 Junjie Zhou , Wei Shao , Yagao Yue , Wei Mu , Peng Wan , Qi Zhu , Daoqiang Zhang

Recent advances in multi-modal algorithms have driven and been driven by the increasing availability of large image-text datasets, leading to significant strides in various fields, including computational pathology. However, in most…

Computer Vision and Pattern Recognition · Computer Science 2024-06-21 Jiawen Chen , Muqing Zhou , Wenrong Wu , Jinwei Zhang , Yun Li , Didong Li

Visual tokenizers play a central role in latent image generation by bridging high-dimensional images and tractable generative modeling. However, most existing tokenizers are still trained with reconstruction-dominated objectives, which…

Computer Vision and Pattern Recognition · Computer Science 2026-03-27 Qingfeng Li , Haoxian Zhang , Xu He , Songlin Tang , Zhixue Fang , Xiaoqiang Liu , Pengfei Wan Guoqi Li

With the rapid advancement of Spatial Resolved Transcriptomics (SRT) technology, it is now possible to comprehensively measure gene transcription while preserving the spatial context of tissues. Spatial domain identification and gene…

Genomics · Quantitative Biology 2024-08-14 Donghai Fang , Fangfang Zhu , Dongting Xie , Wenwen Min

Transformer has been widely used for self-supervised pre-training in Natural Language Processing (NLP) and achieved great success. However, it has not been fully explored in visual self-supervised learning. Meanwhile, previous methods only…

Computer Vision and Pattern Recognition · Computer Science 2021-10-26 Zhaowen Li , Zhiyang Chen , Fan Yang , Wei Li , Yousong Zhu , Chaoyang Zhao , Rui Deng , Liwei Wu , Rui Zhao , Ming Tang , Jinqiao Wang

Human and animal tissues consist of heterogeneous cell types that organize and interact in highly structured manners. Bulk and single-cell sequencing technologies remove cells from their original microenvironments, resulting in a loss of…

Quantitative Methods · Quantitative Biology 2022-02-08 Boxiang Liu , Yanjun Li , Liang Zhang

Effectively modeling non-stationary dynamics in probabilistic multivariate time series(MTS) forecasting requires balancing expressiveness with robustness. Existing parametric approaches benefit from strong inductive biases but lack…

Machine Learning · Computer Science 2026-05-25 Jinglin Li , Jun Tan , QI Fang , Ning Gui

Medical vision-language pre-training methods mainly leverage the correspondence between paired medical images and radiological reports. Although multi-view spatial images and temporal sequences of image-report pairs are available in…

Artificial Intelligence · Computer Science 2024-05-31 Jinxia Yang , Bing Su , Wayne Xin Zhao , Ji-Rong Wen

Deep learning has shown strong potential in cancer classification from whole-slide images (WSIs), but the need for extensive expert annotations often limits its success. Annotation-free approaches, such as multiple instance learning (MIL)…

Computer Vision and Pattern Recognition · Computer Science 2026-03-12 Willmer Rafell Quinones Robles , Sakonporn Noree , Jongwoo Kim , Young Sin Ko , Bryan Wong , Mun Yong Yi

Optical and Synthetic Aperture Radar (SAR) image registration is crucial for multi-modal image fusion and applications. However, several challenges limit the performance of existing deep learning-based methods in cross-modal image…

Computer Vision and Pattern Recognition · Computer Science 2026-02-11 Wei Wang , Dou Quan , Ning Huyan , Chonghua Lv , Shuang Wang , Yunan Li , Licheng Jiao

In semi-supervised segmentation, capturing meaningful semantic structures from unlabeled data is essential. This is particularly challenging in histopathology image analysis, where objects are densely distributed. To address this issue, we…

Computer Vision and Pattern Recognition · Computer Science 2025-10-03 Meilong Xu , Xiaoling Hu , Shahira Abousamra , Chen Li , Chao Chen

Pretraining and fine-tuning have emerged as a new paradigm in remote sensing image interpretation. Among them, Masked Autoencoder (MAE)-based pretraining stands out for its strong capability to learn general feature representations via…

Computer Vision and Pattern Recognition · Computer Science 2026-03-10 Xiaokang Zhang , Bo Li , Chufeng Zhou , Weikang Yu , Lefei Zhang

Running machine learning analytics over geographically distributed datasets is a rapidly arising problem in the world of data management policies ensuring privacy and data security. Visualizing high dimensional data using tools such as…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-13 Viska Wei , Nikita Ivkin , Vladimir Braverman , Alexander Szalay

Accurate analysis of histopathological images is critical for disease diagnosis and treatment planning. Whole-slide images (WSIs), which digitize tissue specimens at gigapixel resolution, are fundamental to this process but require…

Computer Vision and Pattern Recognition · Computer Science 2026-05-07 Enhui Chai , Sicheng Chen , Tianyi Zhang , Chad Wong , Kecheng Huang , Zeyu Liu , Fei Xia

Pre-trained Vision-Language Models (VLMs), like CLIP, exhibit strong generalization ability to downstream tasks but struggle in few-shot scenarios. Existing prompting techniques primarily focus on global text and image representations, yet…

Computer Vision and Pattern Recognition · Computer Science 2024-07-12 Xin Liu , Jiamin Wu , and Wenfei Yang , Xu Zhou , Tianzhu Zhang

A high-performance image compression algorithm is crucial for real-time information transmission across numerous fields. Despite rapid progress in image compression, computational inefficiency and poor redundancy modeling still pose…

Computer Vision and Pattern Recognition · Computer Science 2025-08-25 Fanhu Zeng , Hao Tang , Yihua Shao , Siyu Chen , Ling Shao , Yan Wang
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