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Discontinuous Named Entity Recognition (DNER) presents a challenging problem where entities may be scattered across multiple non-adjacent tokens, making traditional sequence labelling approaches inadequate. Existing methods predominantly…

Computation and Language · Computer Science 2025-03-25 Rina Carines Cabral , Soyeon Caren Han , Areej Alhassan , Riza Batista-Navarro , Goran Nenadic , Josiah Poon

Research on overlapped and discontinuous named entity recognition (NER) has received increasing attention. The majority of previous work focuses on either overlapped or discontinuous entities. In this paper, we propose a novel span-based…

Computation and Language · Computer Science 2021-06-29 Fei Li , Zhichao Lin , Meishan Zhang , Donghong Ji

Biomedical named entity recognition (BNER) serves as the foundation for numerous biomedical text mining tasks. Unlike general NER, BNER require a comprehensive grasp of the domain, and incorporating external knowledge beyond training data…

Computation and Language · Computer Science 2023-07-06 Junyi Bian , Rongze Jiang , Weiqi Zhai , Tianyang Huang , Hong Zhou , Shanfeng Zhu

Named entity recognition (NER) is a well-studied task in natural language processing. Traditional NER research only deals with flat entities and ignores nested entities. The span-based methods treat entity recognition as a span…

Computation and Language · Computer Science 2021-07-14 Yongliang Shen , Xinyin Ma , Zeqi Tan , Shuai Zhang , Wen Wang , Weiming Lu

Named Entity Recognition (NER) is a critical task in natural language processing, yet it remains particularly challenging for discontinuous entities. The primary difficulty lies in text segmentation, as traditional methods often missegment…

Computation and Language · Computer Science 2026-01-01 Wen-Fang Su , Hsiao-Wei Chou , Wen-Yang Lin

Despite the recent success achieved by several two-stage prototypical networks in few-shot named entity recognition (NER) task, the overdetected false spans at the span detection stage and the inaccurate and unstable prototypes at the type…

Computation and Language · Computer Science 2023-10-17 Yongqi Li , Yu Yu , Tieyun Qian

This paper presents a novel framework, MGNER, for Multi-Grained Named Entity Recognition where multiple entities or entity mentions in a sentence could be non-overlapping or totally nested. Different from traditional approaches regarding…

Computation and Language · Computer Science 2020-04-06 Congying Xia , Chenwei Zhang , Tao Yang , Yaliang Li , Nan Du , Xian Wu , Wei Fan , Fenglong Ma , Philip Yu

Named entity recognition (NER) is a widely studied task in natural language processing. Recently, a growing number of studies have focused on the nested NER. The span-based methods, considering the entity recognition as a span…

Computation and Language · Computer Science 2021-06-22 Zeqi Tan , Yongliang Shen , Shuai Zhang , Weiming Lu , Yueting Zhuang

Nested named entity recognition (NER) aims to identify the entity boundaries and recognize categories of the named entities in a complex hierarchical sentence. Some works have been done using character-level, word-level, or lexicon-level…

Computation and Language · Computer Science 2022-11-08 Yuan Sui , Fanyang Bu , Yingting Hu , Wei Yan , Liang Zhang

Motivation: State-of-the-art biomedical named entity recognition (BioNER) systems often require handcrafted features specific to each entity type, such as genes, chemicals and diseases. Although recent studies explored using neural network…

Information Retrieval · Computer Science 2018-10-09 Xuan Wang , Yu Zhang , Xiang Ren , Yuhao Zhang , Marinka Zitnik , Jingbo Shang , Curtis Langlotz , Jiawei Han

Recent advances in named entity recognition (NER) have pushed the boundary of the task to incorporate visual signals, leading to many variants, including multi-modal NER (MNER) or grounded MNER (GMNER). A key challenge to these tasks is…

Computation and Language · Computer Science 2024-04-03 Hyunjong Ok , Taeho Kil , Sukmin Seo , Jaeho Lee

In this work, we address the NER problem by splitting it into two logical sub-tasks: (1) Span Detection which simply extracts entity mention spans irrespective of entity type; (2) Span Classification which classifies the spans into their…

Computation and Language · Computer Science 2023-11-01 Jatin Arora , Youngja Park

Recent years have seen the paradigm shift of Named Entity Recognition (NER) systems from sequence labeling to span prediction. Despite its preliminary effectiveness, the span prediction model's architectural bias has not been fully…

Computation and Language · Computer Science 2021-06-08 Jinlan Fu , Xuanjing Huang , Pengfei Liu

Named entity recognition (NER) is a fundamental task in natural language processing that aims to identify and classify named entities in text. However, span-based methods for NER typically assign entity types to text spans, resulting in an…

Computation and Language · Computer Science 2023-10-31 Minghao Tang , Yongquan He , Yongxiu Xu , Hongbo Xu , Wenyuan Zhang , Yang Lin

Biomedical named entity recognition (NER) presents unique challenges due to specialized vocabularies, the sheer volume of entities, and the continuous emergence of novel entities. Traditional NER models, constrained by fixed taxonomies and…

Computation and Language · Computer Science 2025-05-22 Anthony Yazdani , Ihor Stepanov , Douglas Teodoro

Named entity recognition (NER) identifies typed entity mentions in raw text. While the task is well-established, there is no universally used tagset: often, datasets are annotated for use in downstream applications and accordingly only…

Computation and Language · Computer Science 2019-10-08 Xiao Huang , Li Dong , Elizabeth Boschee , Nanyun Peng

Traditional named entity recognition (NER) aims to identify text mentions into pre-defined entity types. Continual Named Entity Recognition (CNER) is introduced since entity categories are continuously increasing in various real-world…

Computation and Language · Computer Science 2025-10-14 Yawen Yang , Fukun Ma , Shiao Meng , Aiwei Liu , Lijie Wen

Span-based joint extraction simultaneously conducts named entity recognition (NER) and relation extraction (RE) in text span form. Recent studies have shown that token labels can convey crucial task-specific information and enrich token…

Computation and Language · Computer Science 2022-07-19 Bin Ji , Shasha Li , Jie Yu , Jun Ma , Huijun Liu

In medical documents, it is possible that an entity of interest not only contains a discontiguous sequence of words but also overlaps with another entity. Entities of such structures are intrinsically hard to recognize due to the large…

Computation and Language · Computer Science 2019-09-04 Bailin Wang , Wei Lu

We present a bi-encoder framework for named entity recognition (NER), which applies contrastive learning to map candidate text spans and entity types into the same vector representation space. Prior work predominantly approaches NER as…

Computation and Language · Computer Science 2023-02-24 Sheng Zhang , Hao Cheng , Jianfeng Gao , Hoifung Poon
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