English
Related papers

Related papers: DPCformer: An Interpretable Deep Learning Model fo…

200 papers

Robust genotype-to-phenotype (G2P) prediction is essential for accelerating breeding decisions and genetic gain. However, it remains challenging to measure complex traits under variable field conditions and across years. In this study, we…

Genomics · Quantitative Biology 2026-05-11 Yibin Wang , Murukarthick Jayakodi , Silvas Kirubakaran , Ambika Chandra , Azlan Zahid

Deep learning has markedly advanced image based plant disease diagnosis as improved hardware and dataset quality have enabled increasingly accurate neural network models. This paper presents PD36 C, a compact convolutional neural network…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Shkelqim Sherifi

Organic weed control is a vital to improve crop yield with a sustainable approach. In this work, a directed energy weed control robot prototype specifically designed for organic farms is proposed. The robot uses a novel distributed array…

Robotics · Computer Science 2024-06-03 Deng Cao , Hongbo Zhang , Rajveer Dhillon

Western countries rely heavily on wheat, and yield prediction is crucial. Time-series deep learning models, such as Long Short Term Memory (LSTM), have already been explored and applied to yield prediction. Existing literature reported that…

Machine Learning · Computer Science 2023-07-05 Yogesh Bansal , David Lillis , Mohand Tahar Kechadi

Gene promoters are the key DNA regulatory elements positioned around the transcription start sites and are responsible for regulating gene transcription process. Various alignment-based, signal-based and content-based approaches are…

Genomics · Quantitative Biology 2021-05-18 Nikita Bhandari , Satyajeet Khare , Rahee Walambe , Ketan Kotecha

This paper presents Densely Supervised Grasp Detector (DSGD), a deep learning framework which combines CNN structures with layer-wise feature fusion and produces grasps and their confidence scores at different levels of the image hierarchy…

Computer Vision and Pattern Recognition · Computer Science 2019-01-31 Umar Asif , Jianbin Tang , Stefan Harrer

Tomatoes are a major crop worldwide, and accurately classifying their maturity is important for many agricultural applications, such as harvesting, grading, and quality control. In this paper, the authors propose a novel method for tomato…

Computer Vision and Pattern Recognition · Computer Science 2025-03-26 Asim Khan , Taimur Hassan , Muhammad Shafay , Israa Fahmy , Naoufel Werghi , Lakmal Seneviratne , Irfan Hussain

Crop yield prediction typically involves the utilization of either theory-driven process-based crop growth models, which have proven to be difficult to calibrate for local conditions, or data-driven machine learning methods, which are known…

Crop yield forecasting plays a significant role in addressing growing concerns about food security and guiding decision-making for policymakers and farmers. When deep learning is employed, understanding the learning and decision-making…

Machine Learning · Computer Science 2025-08-12 Hiba Najjar , Miro Miranda , Marlon Nuske , Ribana Roscher , Andreas Dengel

This review explores recent advancements in data fusion techniques and Transformer-based remote sensing applications in precision agriculture. Using a systematic, data-driven approach, we analyze research trends from 1994 to 2024,…

Machine Learning · Computer Science 2025-09-22 Mahdi Saki , Rasool Keshavarz , Daniel Franklin , Mehran Abolhasan , Justin Lipman , Negin Shariati

Precision soil greenhouse gas (GHG) flux prediction is essential in agricultural systems for assessing environmental impacts, developing emission mitigation strategies and promoting sustainable agriculture. Due to the lack of advanced…

Machine Learning · Computer Science 2025-06-23 Yu Zhang , Gaoshan Bi , Simon Jeffery , Max Davis , Yang Li , Qing Xue , Po Yang

We present a novel multi-parent crossover operator in genetic algorithms (GAs) called ``Deep Neural Crossover'' (DNC). Unlike conventional GA crossover operators that rely on a random selection of parental genes, DNC leverages the…

Neural and Evolutionary Computing · Computer Science 2024-07-22 Eliad Shem-Tov , Achiya Elyasaf

Random Forest (RF) and Gradient Boosting Regression Trees (GBRT) regression models along with three cheminformatics data sets (RDkit, Mordred, Morgan) have been used to predict the power conversion efficiency (PCE) of organic solar cells…

Computational Physics · Physics 2024-11-14 Omar A. Alvarez-Gonzaga , Ulises A. Vergara-Beltran , Juan I. Rodriguez

We investigate two approaches to increase the efficiency of phenotypic prediction from genome-wide markers, which is a key step for genomic selection (GS) in plant and animal breeding. The first approach is feature selection based on Markov…

Methodology · Statistics 2013-09-09 Marco Scutari , Ian Mackay , David J. Balding

Recent research on the application of remote sensing and deep learning-based analysis in precision agriculture demonstrated a potential for improved crop management and reduced environmental impacts of agricultural production. Despite the…

Computer Vision and Pattern Recognition · Computer Science 2021-11-01 Sujata Butte , Aleksandar Vakanski , Kasia Duellman , Haotian Wang , Amin Mirkouei

Agricultural research has accelerated in recent years, yet farmers often lack the time and resources for on-farm research due to the demands of crop production and farm operations. Seed classification offers valuable insights into quality…

Computer Vision and Pattern Recognition · Computer Science 2025-05-29 Elhoucine Elfatimia , Recep Eryigitb , Lahcen Elfatimi

Deep learning models have demonstrated remarkable results for various computer vision tasks, including the realm of medical imaging. However, their application in the medical domain is limited due to the requirement for large amounts of…

Computer Vision and Pattern Recognition · Computer Science 2023-11-14 Aryan Singh , Pepijn Van de Ven , Ciarán Eising , Patrick Denny

Rapid advancements in genome sequencing have led to the collection of vast amounts of genomics data. Researchers may be interested in using machine learning models on such data to predict the pathogenicity or clinical significance of a…

Quantitative Methods · Quantitative Biology 2024-08-15 Arshmeet Kaur , Morteza Sarmadi

Tandem mass spectrometry (MS/MS) is a high-throughput technology used toidentify the proteins in a complex biological sample, such as a drop of blood. A collection of spectra is generated at the output of the process, each spectrum of which…

Quantitative Methods · Quantitative Biology 2019-09-06 John T. Halloran , David M. Rocke

The prediction of phenotypic traits using high-density genomic data has many applications such as the selection of plants and animals of commercial interest; and it is expected to play an increasing role in medical diagnostics. Statistical…

Methodology · Statistics 2016-09-29 Marco Scutari , Ian Mackay , David Balding