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Spatiotemporal dynamics pervade the natural sciences, from the morphogen dynamics underlying patterning in animal pigmentation to the protein waves controlling cell division. A central challenge lies in understanding how controllable…

Pattern Formation and Solitons · Physics 2025-03-03 Matthew Ricci , Guy Pelc , Zoe Piran , Noa Moriel , Mor Nitzan

Animal movement exhibits complex behavior which can be influenced by unobserved environmental conditions. We propose a model which allows for a spatially-varying movement rate and spatially-varying drift through a semiparametric potential…

Applications · Statistics 2017-02-28 James C. Russell , Ephraim M. Hanks , Murali Haran , David P. Hughes

We address the inverse problem of identifying nonlocal interaction potentials in nonlinear aggregation-diffusion equations from noisy discrete trajectory data. Our approach involves formulating and solving a regularized variational problem,…

Analysis of PDEs · Mathematics 2025-01-31 Jose A. Carrillo , Gissell Estrada-Rodriguez , Laszlo Mikolas , Sui Tang

Many systems with propagation dynamics, such as spike propagation in neural networks and spreading of infectious diseases, can be approximated by autoregressive models. The estimation of model parameters can be complicated by the…

Neurons and Cognition · Quantitative Biology 2021-01-01 Jorge de Heuvel , Jens Wilting , Moritz Becker , Viola Priesemann , Johannes Zierenberg

The Fokker-Planck (FP) equation governing the evolution of the probability density function (PDF) is applicable to many disciplines but it requires specification of the coefficients for each case, which can be functions of space-time and…

Computational Physics · Physics 2020-08-26 Xiaoli Chen , Liu Yang , Jinqiao Duan , George Em Karniadakis

The spatial propagation of many livestock infectious diseases critically depends on the animal movements among premises; so the knowledge of movement data may help us to detect, manage and control an outbreak. The identification of robust…

Populations and Evolution · Quantitative Biology 2012-10-03 Paolo Bajardi , Alain Barrat , Lara Savini , Vittoria Colizza

Sampling invariant distributions from an It\^o diffusion process presents a significant challenge in stochastic simulation. Traditional numerical solvers for stochastic differential equations require both a fine step size and a lengthy…

Machine Learning · Computer Science 2025-06-06 Zhiqiang Cai , Yu Cao , Yuanfei Huang , Xiang Zhou

Insect-borne diseases are diseases carried by insects affecting humans, animals or plants. They have the potential to generate massive outbreaks such as the Zika epidemic in 2015-2016 mostly distributed in the Americas, the Pacific and…

Analysis of PDEs · Mathematics 2020-02-19 Olivier Martin , Yasmil Fernandez-Diclo , Jerome Coville , Samuel Soubeyrand

We consider fully discrete finite element approximations for a semilinear optimal control system of partial differential equations in two cases: for distributed and Robin boundary control. The ecological predator-prey optimal control model…

Numerical Analysis · Mathematics 2024-04-25 EFthymios N. Karatzas

Predicting the human burden of vector-borne diseases from limited surveillance data remains a major challenge, particularly in the presence of nonlinear transmission dynamics and delayed effects arising from vector ecology and human…

Dynamical Systems · Mathematics 2026-02-20 Dimitri Breda , Muhammad Tanveer , Jianhong Wu , Xue Zhang

We introduce Fourier Weak SINDy, a minimal noise-robust and interpretable derivative-free equation learning method that combines weak-form sparse equation learning with spectral density estimation for data-driven test function selection. By…

Machine Learning · Computer Science 2026-04-23 Zhiheng Chen , Urban Fasel , Anastasia Bizyaeva

Partial differential equations (PDEs) form a central component of scientific computing. Among recent advances in deep learning, evolutionary neural networks have been developed to successively capture the temporal dynamics of time-dependent…

Machine Learning · Computer Science 2026-02-24 Bongseok Kim , Jiahao Zhang , Guang Lin

Learning the underlying potential energy of stochastic gradient systems from partial and noisy observations is a fundamental problem arising in physics, chemistry, and data-driven modeling. Classical approaches often rely on direct…

Machine Learning · Computer Science 2026-04-23 Yubin Lu , Xiaofan Li , Chun Liu , Qi Tang , Yiwei Wang

In this study, we explore the application of Physics-Informed Neural Networks (PINNs) to the analysis of bifurcation phenomena in ecological migration models. By integrating the fundamental principles of diffusion-advection-reaction…

Chaotic Dynamics · Physics 2025-11-25 Lujie Yin , Xing Lv

Nonlinear Fokker-Planck equations play a major role in modeling large systems of interacting particles with a proved effectiveness in describing real world phenomena ranging from classical fields such as fluids and plasma to social and…

Numerical Analysis · Mathematics 2023-11-23 Giacomo Dimarco , Lorenzo Pareschi , Mattia Zanella

Optimization problems constrained by high-dimensional, time-dependent partial differential equations require repeated forward and sensitivity solves, making high-fidelity optimization computationally prohibitive in many-query design and…

Optimization and Control · Mathematics 2026-05-21 April Tran , Terry Haut , David Bortz , Youngsoo Choi

Identification of the particle interaction potential is a challenging and important task in dusty plasma, colloids, and smart materials as it allows the characterization of structure formation and helps predict phase transitions. With the…

In this paper, we consider three non-linear kinetic partial differential equations that emerge in the modeling of motion of rod-shaped cells such as myxobacteria. This motion is characterized by nematic alignment with neighboring cells,…

Analysis of PDEs · Mathematics 2024-01-11 Patrick Murphy , Oleg Igoshin , Misha Perepelitsa , Ilya Timofeyev

We establish a general form of explicit, input-dependent, measure-valued warpings for learning nonstationary kernels. While stationary kernels are ubiquitous and simple to use, they struggle to adapt to functions that vary in smoothness…

Machine Learning · Computer Science 2020-10-12 Anthony Tompkins , Rafael Oliveira , Fabio Ramos

The quantitative formulation of evolution equations is the backbone for prediction, control, and understanding of dynamical systems across diverse scientific fields. Besides deriving differential equations for dynamical systems based on…

Data Analysis, Statistics and Probability · Physics 2025-01-06 Tim W. Kroll , Oliver Kamps