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Chromosomal DNA is characterized by variation between individuals at the level of entire chromosomes (e.g., aneuploidy in which the chromosome copy number is altered), segmental changes (including insertions, deletions, inversions, and…
Using images acquired by different satellite sensors has shown to improve classification performance in the framework of crop mapping from satellite image time series (SITS). Existing state-of-the-art architectures use self-attention…
Ground-based optical surveys such as PanSTARRS, DES, and LSST, will produce large catalogs to limiting magnitudes of r > 24. Star-galaxy separation poses a major challenge to such surveys because galaxies---even very compact…
The increasing popularity of Artificial Intelligence in recent years has led to a surge in interest in image classification, especially in the agricultural sector. With the help of Computer Vision, Machine Learning, and Deep Learning, the…
Genetic sequence data are well described by hidden Markov models (HMMs) in which latent states correspond to clusters of similar mutation patterns. Theory from statistical genetics suggests that these HMMs are nonhomogeneous (their…
Understanding the reasons for the success of deep neural networks trained using stochastic gradient-based methods is a key open problem for the nascent theory of deep learning. The types of data where these networks are most successful,…
Territorial control is a key aspect shaping the dynamics of civil war. Despite its importance, we lack data on territorial control that are fine-grained enough to account for subnational spatio-temporal variation and that cover a large set…
Satellite Image Time Series (SITS) data has proven effective for agricultural tasks due to its rich spectral and temporal nature. In this study, we tackle the task of stress detection in sugar-beet fields using a fully unsupervised…
In many areas of computational biology, hidden Markov models (HMMs) have been used to model local genomic features. In particular, coalescent HMMs have been used to infer ancient population sizes, migration rates, divergence times, and…
Offline handwritten text recognition from images is an important problem for enterprises attempting to digitize large volumes of handmarked scanned documents/reports. Deep recurrent models such as Multi-dimensional LSTMs have been shown to…
This paper is concerned with the computational complexity of learning the Hidden Markov Model (HMM). Although HMMs are some of the most widely used tools in sequential and time series modeling, they are cryptographically hard to learn in…
Spurred in part by the ever-growing number of sensors and web-based methods of collecting data, the use of Intensive Longitudinal Data (ILD) is becoming more common in the social and behavioural sciences. The ILD collected in this field are…
Ultra-wideband (UWB) multistatic radar can be used for target detection and tracking in buildings and rooms. Target detection and tracking relies on accurate knowledge of the bistatic delay. Noise, measurement error, and the problem of…
We demonstrate the application of pattern recognition algorithms via hidden Markov models (HMM) for qubit readout. This scheme provides a state-path trajectory approach capable of detecting qubit state transitions and makes for a robust…
Lane determination and lane sequence determination are important components for many Connected and Automated Vehicle (CAV) applications. Lane determination has been solved using Hidden Markov Model (HMM) among other methods. The existing…
Agriculture plays a crucial role in the global economy and social stability, and accurate crop yield prediction is essential for rational planting planning and decision-making. This study focuses on crop yield Time-Series Data prediction.…
Deep Neural Networks (DNNs) are getting increasing attention to deal with Land Cover Classification (LCC) relying on Satellite Image Time Series (SITS). Though high performances can be achieved, the rationale of a prediction yielded by a…
Variable order sequence modeling is an important problem in artificial and natural intelligence. While overcomplete Hidden Markov Models (HMMs), in theory, have the capacity to represent long-term temporal structure, they often fail to…
We introduce a simple yet effective early fusion method for crop yield prediction that handles multiple input modalities with different temporal and spatial resolutions. We use high-resolution crop yield maps as ground truth data to train…
We propose the segmented iHMM (siHMM), a hierarchical infinite hidden Markov model (iHMM) that supports a simple, efficient inference scheme. The siHMM is well suited to segmentation problems, where the goal is to identify points at which a…