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This paper presents HGEN that pioneers ensemble learning for heterogeneous graphs. We argue that the heterogeneity in node types, nodal features, and local neighborhood topology poses significant challenges for ensemble learning,…

Machine Learning · Computer Science 2026-02-05 Jiajun Shen , Yufei Jin , Yi He , Xingquan Zhu

Multimodal data plays a critical role in web-based recommendation systems, where information from diverse modalities such as vision and text enhances representation learning. However, real-world multimodal datasets often suffer from…

Information Retrieval · Computer Science 2026-05-04 Yuan Li , Jun Hu , Jiaxin Jiang , Bryan Hooi , Bingsheng He

In recent years, self-supervised learning has emerged as a promising approach in addressing the issues of label dependency and poor generalization performance in traditional GNNs. However, existing self-supervised methods have limited…

Machine Learning · Computer Science 2023-08-01 Mengyi Yuan , Minjie Chen , Xiang Li

Graph neural networks (GNNs) have achieved great success in various graph problems. However, most GNNs are Message Passing Neural Networks (MPNNs) based on the homophily assumption, where nodes with the same label are connected in graphs.…

Machine Learning · Computer Science 2022-10-18 Junjie Xu , Enyan Dai , Xiang Zhang , Suhang Wang

Since Multimodal Emotion Recognition in Conversation (MERC) can be applied to public opinion monitoring, intelligent dialogue robots, and other fields, it has received extensive research attention in recent years. Unlike traditional…

Machine Learning · Computer Science 2024-07-25 Tao Meng , Fuchen Zhang , Yuntao Shou , Hongen Shao , Wei Ai , Keqin Li

Multi-Modal Entity Alignment (MMEA) is a critical task that aims to identify equivalent entity pairs across multi-modal knowledge graphs (MMKGs). However, this task faces challenges due to the presence of different types of information,…

Computation and Language · Computer Science 2023-10-11 Qian Li , Cheng Ji , Shu Guo , Zhaoji Liang , Lihong Wang , Jianxin Li

Graph data often exhibits complex geometric heterogeneity, where structures with varying local curvature, such as tree-like hierarchies and dense communities, coexist within a single network. Existing geometric GNNs, which embed graphs into…

Machine Learning · Computer Science 2026-01-21 Xudong Wang , Chris Ding , Tongxin Li , Jicong Fan

Combining different modalities of data from human tissues has been critical in advancing biomedical research and personalised medical care. In this study, we leverage a graph embedding model (i.e VGAE) to perform link prediction on…

Genomics · Quantitative Biology 2021-07-27 Amine Amor , Pietro Lio' , Vikash Singh , Ramon Viñas Torné , Helena Andres Terre

Recent years have witnessed the emerging success of graph neural networks (GNNs) for modeling structured data. However, most GNNs are designed for homogeneous graphs, in which all nodes and edges belong to the same types, making them…

Machine Learning · Computer Science 2020-03-04 Ziniu Hu , Yuxiao Dong , Kuansan Wang , Yizhou Sun

Opto-electronic computing combines the complementary strengths of photonics and electronics to deliver ultrahigh computational throughput with high energy efficiency. However, its practical deployment for real-world applications has been…

A common practice in heterogeneous graph neural networks (HGNNs) is to condition parameters on node/edge types, assuming types reflect semantic roles. However, this can cause overreliance on surface-level labels and impede cross-type…

Machine Learning · Computer Science 2026-01-23 Georgiy Shakirov , Albert Arakelov

Numerous Graph Neural Networks (GNNs) have been developed to tackle the challenge of Knowledge Graph Embedding (KGE). However, many of these approaches overlook the crucial role of relation information and inadequately integrate it with…

Machine Learning · Computer Science 2024-09-24 Peyman Baghershahi , Reshad Hosseini , Hadi Moradi

Graph classification is an important learning task for graph-structured data. Graph neural networks (GNNs) have recently gained growing attention in graph learning and have shown significant improvements in many important graph problems.…

Machine Learning · Computer Science 2024-01-31 Tao Wen , Elynn Chen , Yuzhou Chen

Learning network representations is a fundamental task for many graph applications such as link prediction, node classification, graph clustering, and graph visualization. Many real-world networks are interpreted as dynamic networks and…

Machine Learning · Computer Science 2019-10-07 Sedigheh Mahdavi , Shima Khoshraftar , Aijun An

Empirical networked systems are often only partially observed: sampling frames, crawling policies, privacy constraints, and temporal gaps can leave actors and edges unobserved. This complicates robustness and sensitivity analysis because…

Social and Information Networks · Computer Science 2026-05-12 Mehrdad Jalali , Binh Vu , Swati Chandna , Chen Ding

Emotion Recognition in Conversations (ERC) has considerable prospects for developing empathetic machines. For multimodal ERC, it is vital to understand context and fuse modality information in conversations. Recent graph-based fusion…

Computation and Language · Computer Science 2022-03-07 Dou Hu , Xiaolong Hou , Lingwei Wei , Lianxin Jiang , Yang Mo

Graph Neural Networks (GNNs) have been widely applied to various fields due to their powerful representations of graph-structured data. Despite the success of GNNs, most existing GNNs are designed to learn node representations on the fixed…

Machine Learning · Computer Science 2021-06-14 Seongjun Yun , Minbyul Jeong , Sungdong Yoo , Seunghun Lee , Sean S. Yi , Raehyun Kim , Jaewoo Kang , Hyunwoo J. Kim

In anti-cancer drug development, a major scientific challenge is disentangling the complex relationships between high-dimensional genomics data from patient tumor samples, the corresponding tumor's organ of origin, the drug targets…

Machine Learning · Computer Science 2024-03-29 Omid Bazgir , Zichen Wang , Ji Won Park , Marc Hafner , James Lu

Graph Neural Networks (GNNs) have achieved remarkable success in diverse real-world applications. Traditional GNNs are designed based on homophily, which leads to poor performance under heterophily scenarios. Current solutions deal with…

Social and Information Networks · Computer Science 2023-01-26 Fengzhao Shi , Ren Li , Yanan Cao , Yanmin Shang , Lanxue Zhang , Chuan Zhou , Jia Wu , Shirui Pan

Analyzing the motion of multiple biological agents, be it cells or individual animals, is pivotal for the understanding of complex collective behaviors. With the advent of advanced microscopy, detailed images of complex tissue formations…

Biological Physics · Physics 2024-11-19 Masahito Uwamichi , Simon K. Schnyder , Tetsuya J. Kobayashi , Satoshi Sawai