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Knowledge Graph Embedding (KGE) models are used to learn continuous representations of entities and relations. A key task in the literature is predicting missing links between entities. However, Knowledge Graphs are not just sets of links…

Artificial Intelligence · Computer Science 2023-08-28 Thiviyan Thanapalasingam , Emile van Krieken , Peter Bloem , Paul Groth

Let $G$ be an $n$-vertex graph with $m$ edges. When asked a subset $S$ of vertices, a cut query on $G$ returns the number of edges of $G$ that have exactly one endpoint in $S$. We show that there is a bounded-error quantum algorithm that…

Data Structures and Algorithms · Computer Science 2020-08-05 Troy Lee , Miklos Santha , Shengyu Zhang

Despite their success in various domains, the growing dependence on GNNs raises a critical concern about the nature of the combinatorial reasoning underlying their predictions, which is often hidden within their black-box architectures.…

Machine Learning · Computer Science 2026-03-03 Yue Niu , Zhaokai Sun , Jiayi Yang , Xiaofeng Cao , Rui Fan , Xin Sun , Hanli Wang , Wei Ye

We propose a theoretical framework for training Graph Neural Networks (GNNs) on large input graphs via training on small, fixed-size sampled subgraphs. This framework is applicable to a wide range of models, including popular sampling-based…

Machine Learning · Computer Science 2023-10-18 Yeganeh Alimohammadi , Luana Ruiz , Amin Saberi

Graph neural networks have demonstrated remarkable success in predicting molecular properties by leveraging the rich structural information encoded in molecular graphs. However, their black-box nature reduces interpretability, which limits…

Machine Learning · Computer Science 2025-08-22 Sebastian Musiał , Bartosz Zieliński , Tomasz Danel

Mesh-based simulations play a key role when modeling complex physical systems that, in many disciplines across science and engineering, require the solution of parametrized time-dependent nonlinear partial differential equations (PDEs). In…

Numerical Analysis · Mathematics 2023-08-04 Nicola Rares Franco , Stefania Fresca , Filippo Tombari , Andrea Manzoni

In this paper we introduce a novel way of estimating prediction uncertainty in deep networks through the use of uncertainty surrogates. These surrogates are features of the penultimate layer of a deep network that are forced to match…

Machine Learning · Computer Science 2021-04-19 Radhakrishna Achanta , Natasa Tagasovska

A new conceptual foundation for the notion of "information" is proposed, based on the concept of a "distinction graph": a graph in which two nodes are connected iff they cannot be distinguished by a particular observer. The "graphtropy" of…

Artificial Intelligence · Computer Science 2019-02-05 Ben Goertzel

Recent advancements in graph learning have revolutionized the way to understand and analyze data with complex structures. Notably, Graph Neural Networks (GNNs), i.e. neural network architectures designed for learning graph representations,…

Machine Learning · Computer Science 2024-07-09 Yu Huang , Min Zhou , Menglin Yang , Zhen Wang , Muhan Zhang , Jie Wang , Hong Xie , Hao Wang , Defu Lian , Enhong Chen

This paper analyzes neural networks through graph variables and statistical sufficiency. We interpret neural network layers as graph-based transformations, where neurons act as pairwise functions between inputs and learned anchor points.…

Machine Learning · Computer Science 2025-08-11 Cencheng Shen , Yuexiao Dong

Multitude of deep learning models have been proposed for node classification in graphs. However, they tend to perform poorly under labeled-data scarcity. Although Few-shot learning for graphs has been introduced to overcome this problem,…

Machine Learning · Computer Science 2026-02-02 Appan Rakaraddi , Lam Siew-Kei , Mahardhika Pratama , Marcus de Carvalho

Theoretical analyses for graph learning methods often assume a complete observation of the input graph. Such an assumption might not be useful for handling any-size graphs due to the scalability issues in practice. In this work, we develop…

Machine Learning · Computer Science 2021-11-08 Takanori Maehara , Hoang NT

We study transfer learning for estimation in latent variable network models. In our setting, the conditional edge probability matrices given the latent variables are represented by $P$ for the source and $Q$ for the target. We wish to…

Machine Learning · Computer Science 2024-06-07 Akhil Jalan , Arya Mazumdar , Soumendu Sundar Mukherjee , Purnamrita Sarkar

In an increasingly interconnected world, understanding and summarizing the structure of these networks becomes increasingly relevant. However, this task is nontrivial; proposed summary statistics are as diverse as the networks they…

Statistics Theory · Mathematics 2020-04-15 Lee M. Gunderson , Gecia Bravo-Hermsdorff

Graph Neural Networks (GNNs) have shown remarkable performance on graph-structured data. However, recent empirical studies suggest that GNNs are very susceptible to distribution shift. There is still significant ambiguity about why…

Machine Learning · Computer Science 2023-06-07 Qi Zhu , Yizhu Jiao , Natalia Ponomareva , Jiawei Han , Bryan Perozzi

Graph Neural Networks (GNNs) are powerful machine learning models that excel at analyzing structured data represented as graphs, demonstrating remarkable performance in applications like social network analysis and recommendation systems.…

Quantum Physics · Physics 2024-05-28 Yidong Liao , Xiao-Ming Zhang , Chris Ferrie

Graph neural networks (GNNs) have shown advantages in graph-based analysis tasks. However, most existing methods have the homogeneity assumption and show poor performance on heterophilic graphs, where the linked nodes have dissimilar…

Machine Learning · Computer Science 2024-04-16 Tianhao Peng , Wenjun Wu , Haitao Yuan , Zhifeng Bao , Zhao Pengrui , Xin Yu , Xuetao Lin , Yu Liang , Yanjun Pu

We study the two inference problems of detecting and recovering an isolated community of \emph{general} structure planted in a random graph. The detection problem is formalized as a hypothesis testing problem, where under the null…

Data Structures and Algorithms · Computer Science 2022-01-25 Wasim Huleihel

Logical rule learning, a prominent category of knowledge graph (KG) reasoning methods, constitutes a critical research area aimed at learning explicit rules from observed facts to infer missing knowledge. However, like all KG reasoning…

Artificial Intelligence · Computer Science 2025-07-11 Shixuan Liu , Yue He , Yunfei Wang , Hao Zou , Haoxiang Cheng , Wenjing Yang , Peng Cui , Zhong Liu

Sequential generative models conditioned on uncertain rewards are central to AI-driven scientific discovery, yet the epistemic uncertainty they inherit from imperfect reward estimates remains unquantified. We propagate this uncertainty…

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