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Scarcity of high quality annotated images remains a limiting factor for training accurate image segmentation models. While more and more annotated datasets become publicly available, the number of samples in each individual database is…

Computer Vision and Pattern Recognition · Computer Science 2021-07-14 Gregory Filbrandt , Konstantinos Kamnitsas , David Bernstein , Alexandra Taylor , Ben Glocker

Labeling training datasets has become a key barrier to building medical machine learning models. One strategy is to generate training labels programmatically, for example by applying natural language processing pipelines to text reports…

Large-scale vision models like SAM have extensive visual knowledge, yet their general nature and computational demands limit their use in specialized tasks like medical image segmentation. In contrast, task-specific models such as U-Net++…

Image and Video Processing · Electrical Eng. & Systems 2025-03-11 Yuchen Mao , Hongwei Li , Yinyi Lai , Giorgos Papanastasiou , Peng Qi , Yunjie Yang , Chengjia Wang

The ability to quickly annotate medical imaging data plays a critical role in training deep learning frameworks for segmentation. Doing so for image volumes or video sequences is even more pressing as annotating these is particularly…

Computer Vision and Pattern Recognition · Computer Science 2021-07-20 Laurent Lejeune , Raphael Sznitman

Partially-supervised multi-organ medical image segmentation aims to develop a unified semantic segmentation model by utilizing multiple partially-labeled datasets, with each dataset providing labels for a single class of organs. However,…

Computer Vision and Pattern Recognition · Computer Science 2024-09-06 Xixi Jiang , Dong Zhang , Xiang Li , Kangyi Liu , Kwang-Ting Cheng , Xin Yang

Despite the remarkable performance of deep learning methods on various tasks, most cutting-edge models rely heavily on large-scale annotated training examples, which are often unavailable for clinical and health care tasks. The labeling…

Computer Vision and Pattern Recognition · Computer Science 2021-03-02 Jialin Peng , Ye Wang

Multi-class segmentation of vertebrae is a non-trivial task mainly due to the high correlation in the appearance of adjacent vertebrae. Hence, such a task calls for the consideration of both global and local context. Based on this…

Computer Vision and Pattern Recognition · Computer Science 2017-03-14 Anjany Sekuboyina , Alexander Valentinitsch , Jan S. Kirschke , Bjoern H. Menze

Multi-modal image registration plays a critical role in precision medicine but faces challenges from non-linear intensity relationships and local optima. While deep learning models enable rapid inference, they often suffer from…

Image and Video Processing · Electrical Eng. & Systems 2026-04-14 Boya Wang , Ruizhe Li , Chao Chen , Xin Chen

Brain tumor segmentation is often based on multiple magnetic resonance imaging (MRI). However, in clinical practice, certain modalities of MRI may be missing, which presents a more difficult scenario. To cope with this challenge, Knowledge…

Computer Vision and Pattern Recognition · Computer Science 2024-08-20 Tianyi Liu , Zhaorui Tan , Muyin Chen , Xi Yang , Haochuan Jiang , Kaizhu Huang

Semi-supervised segmentation tackles the scarcity of annotations by leveraging unlabeled data with a small amount of labeled data. A prominent way to utilize the unlabeled data is by consistency training which commonly uses a…

Computer Vision and Pattern Recognition · Computer Science 2022-03-14 Sukesh Adiga , Jose Dolz , Herve Lombaert

Gastrointestinal (GI) cancer precursors require frequent monitoring for risk stratification of patients. Automated segmentation methods can help to assess risk areas more accurately, and assist in therapeutic procedures or even removal. In…

Image and Video Processing · Electrical Eng. & Systems 2021-07-13 Numan Celik , Sharib Ali , Soumya Gupta , Barbara Braden , Jens Rittscher

Medical image segmentation is inherently uncertain. For a given image, there may be multiple plausible segmentation hypotheses, and physicians will often disagree on lesion and organ boundaries. To be suited to real-world application,…

Computer Vision and Pattern Recognition · Computer Science 2021-09-28 João Lourenço Silva , Arlindo L. Oliveira

Annotating multiple organs in medical images is both costly and time-consuming; therefore, existing multi-organ datasets with labels are often low in sample size and mostly partially labeled, that is, a dataset has a few organs labeled but…

Computer Vision and Pattern Recognition · Computer Science 2020-07-09 Gonglei Shi , Li Xiao , Yang Chen , S. Kevin Zhou

Weakly-supervised segmentation with label-efficient sparse annotations has attracted increasing research attention to reduce the cost of laborious pixel-wise labeling process, while the pairwise affinity modeling techniques play an…

Computer Vision and Pattern Recognition · Computer Science 2023-10-18 Wentong Li , Yuqian Yuan , Song Wang , Wenyu Liu , Dongqi Tang , Jian Liu , Jianke Zhu , Lei Zhang

Class distribution plays an important role in learning deep classifiers. When the proportion of each class in the test set differs from the training set, the performance of classification nets usually degrades. Such a label distribution…

Image and Video Processing · Electrical Eng. & Systems 2022-07-12 Wenao Ma , Cheng Chen , Shuang Zheng , Jing Qin , Huimao Zhang , Qi Dou

In this paper, we present Endo-SemiS, a semi-supervised segmentation framework for providing reliable segmentation of endoscopic video frames with limited annotation. EndoSemiS uses 4 strategies to improve performance by effectively…

Computer Vision and Pattern Recognition · Computer Science 2025-12-22 Hao Li , Daiwei Lu , Xing Yao , Nicholas Kavoussi , Ipek Oguz

Accurate segmentation of infant brain MRI is critical for studying early neurodevelopment and diagnosing neurological disorders. Yet, it remains a fundamental challenge due to continuously evolving anatomy of the subjects, motion artifacts,…

Image and Video Processing · Electrical Eng. & Systems 2025-10-13 Alemu Sisay Nigru , Michele Svanera , Austin Dibble , Connor Dalby , Mattia Savardi , Sergio Benini

Automated segmentation tools often encounter accuracy and adaptability issues when applied to images of different pathology. The purpose of this study is to explore the feasibility of building a workflow to efficiently route images to…

Image and Video Processing · Electrical Eng. & Systems 2024-05-06 Peilong Wang , Timothy L. Kline , Andy D. Missert , Cole J. Cook , Matthew R. Callstrom , Alex Chan , Robert P. Hartman , Zachary S. Kelm , Panagiotis Korfiatis

Semantic segmentation of LiDAR point clouds is an important task in autonomous driving. However, training deep models via conventional supervised methods requires large datasets which are costly to label. It is critical to have…

Computer Vision and Pattern Recognition · Computer Science 2022-10-18 Minghua Liu , Yin Zhou , Charles R. Qi , Boqing Gong , Hao Su , Dragomir Anguelov

Deep convolutional neural networks for image segmentation do not learn the label structure explicitly and may produce segmentations with an incorrect structure, e.g., with disconnected cylindrical structures in the segmentation of tree-like…

Image and Video Processing · Electrical Eng. & Systems 2022-10-11 Shuai Chen , Antonio Garcia-Uceda , Jiahang Su , Gijs van Tulder , Lennard Wolff , Theo van Walsum , Marleen de Bruijne
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