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Graph representation learning, involving both node features and graph structures, is crucial for real-world applications but often encounters pervasive noise. State-of-the-art methods typically address noise by focusing separately on node…

Machine Learning · Computer Science 2024-10-17 Guangxin Su , Yifan Zhu , Wenjie Zhang , Hanchen Wang , Ying Zhang

Although Large Language Models (LLMs) have demonstrated remarkable progress, their proficiency in graph-related tasks remains notably limited, hindering the development of truly general-purpose models. Previous attempts, including…

Machine Learning · Computer Science 2025-08-20 Xiaojun Guo , Ang Li , Yifei Wang , Stefanie Jegelka , Yisen Wang

Graph-structured data exhibit substantial heterogeneity in where their predictive signals originate: in some domains, node-level semantics dominate, while in others, structural patterns play a central role. This structure-semantics…

Computation and Language · Computer Science 2026-04-03 Safal Thapaliya , Zehong Wang , Jiazheng Li , Ziming Li , Yanfang Ye , Chuxu Zhang

Graph Neural Networks (GNNs) have demonstrated remarkable success in various applications, yet they often struggle to capture long-range dependencies (LRD) effectively. This paper introduces GraphMinNet, a novel GNN architecture that…

Machine Learning · Computer Science 2025-02-04 Md Atik Ahamed , Andrew Cheng , Qiang Ye , Qiang Cheng

Pretraining plays a pivotal role in acquiring generalized knowledge from large-scale data, achieving remarkable successes as evidenced by large models in CV and NLP. However, progress in the graph domain remains limited due to fundamental…

Artificial Intelligence · Computer Science 2024-06-21 Yu Song , Haitao Mao , Jiachen Xiao , Jingzhe Liu , Zhikai Chen , Wei Jin , Carl Yang , Jiliang Tang , Hui Liu

Large Language Models (LLMs) have shown strong capabilities in solving problems across domains, including graph-related tasks traditionally addressed by symbolic or algorithmic methods. In this work, we present a framework for structured…

Artificial Intelligence · Computer Science 2025-09-03 Govind Waghmare , Sumedh BG , Sonia Gupta , Srikanta Bedathur

Graph Structure Learning (GSL) focuses on capturing intrinsic dependencies and interactions among nodes in graph-structured data by generating novel graph structures. Graph Neural Networks (GNNs) have emerged as promising GSL solutions,…

Machine Learning · Computer Science 2025-03-11 Zirui Guo , Lianghao Xia , Yanhua Yu , Yuling Wang , Kangkang Lu , Zhiyong Huang , Chao Huang

Inspired by the notion that ``{\it to copy is easier than to memorize}``, in this work, we introduce GNN-LM, which extends the vanilla neural language model (LM) by allowing to reference similar contexts in the entire training corpus. We…

Computation and Language · Computer Science 2022-05-05 Yuxian Meng , Shi Zong , Xiaoya Li , Xiaofei Sun , Tianwei Zhang , Fei Wu , Jiwei Li

In-context learning (ICL) converts static encoders into task-conditioned reasoners, enabling adaptation to new data from just a few examples without updating pretrained parameters. This capability is essential for graph foundation models…

Machine Learning · Computer Science 2026-03-17 Wei Zhuo , Siqiang Luo

Text-Attributed Graphs (TAGs), where each node is associated with text descriptions, are ubiquitous in real-world scenarios. They typically exhibit distinctive structure and domain-specific knowledge, motivating the development of a Graph…

Machine Learning · Computer Science 2025-10-21 Xi Zhu , Haochen Xue , Ziwei Zhao , Wujiang Xu , Jingyuan Huang , Minghao Guo , Qifan Wang , Kaixiong Zhou , Imran Razzak , Yongfeng Zhang

The pretrain-transfer paradigm, which underpins the success of large language models (LLMs), has demonstrated the immense power of creating foundation models that learn generalizable representations from vast datasets. However, extending…

Machine Learning · Computer Science 2025-09-30 Yunhao Liang , Pujun Zhang , Yuan Qu , Shaochong Lin , Zuo-jun Max Shen

Standard transformer-based language models, while powerful for general text, often struggle with the fine-grained syntax and entity relationships in complex technical, engineering documents. To address this, we propose the Contextual Graph…

Computation and Language · Computer Science 2025-08-05 Karan Reddy , Mayukha Pal

Transformers serve as the backbone architectures of Foundational Models, where domain-specific tokenizers allow them to adapt to various domains. Graph Transformers (GTs) have recently emerged as leading models in geometric deep learning,…

Neural and Evolutionary Computing · Computer Science 2025-04-03 Limei Wang , Kaveh Hassani , Si Zhang , Dongqi Fu , Baichuan Yuan , Weilin Cong , Zhigang Hua , Hao Wu , Ning Yao , Bo Long

Graph Neural Networks (GNNs) and their message passing framework that leverages both structural and feature information, have become a standard method for solving graph-based machine learning problems. However, these approaches still…

Machine Learning · Computer Science 2024-11-20 Simon Delarue , Thomas Bonald , Tiphaine Viard

Multi-graph learning is crucial for extracting meaningful signals from collections of heterogeneous graphs. However, effectively integrating information across graphs with differing topologies, scales, and semantics, often in the absence of…

Machine Learning · Computer Science 2026-02-02 Zahra Moslemi , Ziyi Liang , Norbert Fortin , Babak Shahbaba

Large Language Models (LLMs) have garnered considerable interest within both academic and industrial. Yet, the application of LLMs to graph data remains under-explored. In this study, we evaluate the capabilities of four LLMs in addressing…

Artificial Intelligence · Computer Science 2023-09-12 Chang Liu , Bo Wu

In recent years, large language models (LLMs) have demonstrated remarkable generalization capabilities across various natural language processing (NLP) tasks. Similarly, graph foundation models (GFMs) have emerged as a promising direction…

Machine Learning · Computer Science 2025-05-20 Jianxiang Yu , Jiapeng Zhu , Hao Qian , Ziqi Liu , Zhiqiang Zhang , Xiang Li

All industries are trying to leverage Artificial Intelligence (AI) based on their existing big data which is available in so called tabular form, where each record is composed of a number of heterogeneous continuous and categorical columns…

Attention mechanisms are critical to the success of large language models (LLMs), driving significant advancements in multiple fields. However, for graph-structured data, which requires emphasis on topological connections, they fall short…

Artificial Intelligence · Computer Science 2025-05-06 Zhong Guan , Likang Wu , Hongke Zhao , Ming He , Jianpin Fan

While great success has been achieved in building vision models with Contrastive Language-Image Pre-training (CLIP) over internet-scale image-text pairs, building transferable Graph Neural Networks (GNNs) with CLIP pipeline is challenging…

Machine Learning · Computer Science 2025-06-03 Zihao Li , Lecheng Zheng , Bowen Jin , Dongqi Fu , Baoyu Jing , Yikun Ban , Jingrui He , Jiawei Han