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For an integer k\ge2, a [2,k]-ST of a connected graph G is a spanning tree of G in which there are no vertices of degree between 2 and k. A [2,k]-ST is a natural extension of a homeomorphically irreducible spanning tree (HIST), which is a…

Combinatorics · Mathematics 2025-10-10 Yibo Li , Fengming Dong , Huiqing Liu

Some of the most fundamental and well-studied graph parameters are the Diameter (the largest shortest paths distance) and Radius (the smallest distance for which a "center" node can reach all other nodes). The natural and important…

Data Structures and Algorithms · Computer Science 2019-04-29 Mina Dalirrooyfard , Virginia Vassilevska Williams , Nikhil Vyas , Nicole Wein

We study the parameterized complexity of the directed variant of the classical {\sc Steiner Tree} problem on various classes of directed sparse graphs. While the parameterized complexity of {\sc Steiner Tree} parameterized by the number of…

Data Structures and Algorithms · Computer Science 2012-10-02 Mark Jones , Daniel Lokshtanov , M. S. Ramanujan , Saket Saurabh , Ondřej Suchý

We study the minimum diameter spanning tree problem under the reload cost model (DIAMETER-TREE for short) introduced by Wirth and Steffan (2001). In this problem, given an undirected edge-colored graph $G$, reload costs on a path arise at a…

Data Structures and Algorithms · Computer Science 2017-04-25 Julien Baste , Didem Gözüpek , Christophe Paul , Ignasi Sau , Mordechai Shalom , Dimitrios M. Thilikos

Graph G is the square of graph H if two vertices x, y have an edge in G if and only if x, y are of distance at most two in H. Given H it is easy to compute its square H2, however Motwani and Sudan proved that it is NP-complete to determine…

Discrete Mathematics · Computer Science 2009-02-13 Babak Farzad , Lap Chi Lau , Van Bang Le , Nguyen Ngoc Tuy

We study connectivity problems from a fine-grained parameterized perspective. Cygan et al. (TALG 2022) obtained algorithms with single-exponential running time $\alpha^{tw} n^{O(1)}$ for connectivity problems parameterized by treewidth…

Data Structures and Algorithms · Computer Science 2023-03-01 Falko Hegerfeld , Stefan Kratsch

It is known that a number of natural graph problems which are FPT parameterized by treewidth become W-hard when parameterized by clique-width. It is therefore desirable to find a different structural graph parameter which is as general as…

Data Structures and Algorithms · Computer Science 2013-08-15 Jakub Gajarský , Michael Lampis , Sebastian Ordyniak

The Metric Dimension problem asks for a minimum-sized resolving set in a given (unweighted, undirected) graph $G$. Here, a set $S \subseteq V(G)$ is resolving if no two distinct vertices of $G$ have the same distance vector to $S$. The…

Data Structures and Algorithms · Computer Science 2021-02-22 Shaohua Li , Marcin Pilipczuk

Single-cell transcriptomics and proteomics have become a great source for data-driven insights into biology, enabling the use of advanced deep learning methods to understand cellular heterogeneity and gene expression at the single-cell…

Genomics · Quantitative Biology 2025-12-15 Hiren Madhu , João Felipe Rocha , Tinglin Huang , Siddharth Viswanath , Smita Krishnaswamy , Rex Ying

We study the parameterized complexity of the classical Edge Hamiltonian Path problem and give several fixed-parameter tractability results. First, we settle an open question of Demaine et al. by showing that Edge Hamiltonian Path is FPT…

Data Structures and Algorithms · Computer Science 2014-03-11 Michael Lampis , Kazuhisa Makino , Valia Mitsou , Yushi Uno

A large number of NP-hard graph problems become polynomial-time solvable on graph classes where the mim-width is bounded and quickly computable. Hence, when solving such problems on special graph classes, it is helpful to know whether the…

Data Structures and Algorithms · Computer Science 2021-08-27 Nick Brettell , Jake Horsfield , Andrea Munaro , Giacomo Paesani , Daniel Paulusma

We present a new algorithm, Fractional Decomposition Tree (FDT) for finding a feasible solution for an integer program (IP) where all variables are binary. FDT runs in polynomial time and is guaranteed to find a feasible integer solution…

Discrete Mathematics · Computer Science 2020-08-12 Robert D. Carr , Arash Haddadan , Cynthia A. Phillips

Structural parameters of graphs, such as treewidth, play a central role in the study of the parameterized complexity of graph problems. Motivated by the study of parametrized algorithms on phylogenetic networks, scanwidth was introduced…

Computational Complexity · Computer Science 2026-02-09 Jannik Schestag , Norbert Zeh

A set S of vertices of a graph is a defensive alliance if, for each element of S, the majority of its neighbors is in S. The problem of finding a defensive alliance of minimum size in a given graph is NP-hard and there are polynomial-time…

Computational Complexity · Computer Science 2017-07-17 Bernhard Bliem , Stefan Woltran

In this article, we revisit the complexity of the reconfiguration of independent sets under the token sliding rule on chordal graphs. In the \textsc{Token Sliding-Connectivity} problem, the input is a graph $G$ and an integer $k$, and the…

Data Structures and Algorithms · Computer Science 2025-02-19 Rajat Adak , Saraswati Girish Nanoti , Prafullkumar Tale

Chordal graphs form one of the most studied graph classes. Several graph problems that are NP-hard in general become solvable in polynomial time on chordal graphs, whereas many others remain NP-hard. For a large group of problems among the…

Discrete Mathematics · Computer Science 2018-11-01 Oylum Şeker , Pinar Heggernes , Tınaz Ekim , Z. Caner Taşkın

We consider the minimum spanning tree (MST) problem under the restriction that for every vertex v, the edges of the tree that are adjacent to v satisfy a given family of constraints. A famous example thereof is the classical…

Data Structures and Algorithms · Computer Science 2011-07-28 Rico Zenklusen

For graphs $G$ and $H$, a \emph{homomorphism} from $G$ to $H$ is an edge-preserving mapping from the vertex set of $G$ to the vertex set of $H$. For a fixed graph $H$, by \textsc{Hom($H$)} we denote the computational problem which asks…

Computational Complexity · Computer Science 2020-02-20 Karolina Okrasa , Paweł Rzążewski

A set of \( k \) spanning trees in a graph \( G \) is called a set of \textit{completely independent spanning trees (CISTs)} if, for every pair of vertices \( x \) and \( y \), the paths connecting \( x \) and \( y \) across different trees…

Combinatorics · Mathematics 2025-03-20 R. Barabde , S. A. Mane , S. A. Kandekar

In this lecture we will consider the minimum weight spanning tree (MST) problem, i.e., one of the simplest and most vital combinatorial optimization problems. We will discuss a particular greedy algorithm that allows to compute a MST for…

Data Structures and Algorithms · Computer Science 2012-09-21 O. Melchert