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We consider a particular instance of the lift of controlled systems recently proposed in the theory of irreversible thermodynamics and show that it leads to a variational principle for an optimal control in the sense of Pontryagin. Then we…

Populations and Evolution · Quantitative Biology 2018-04-11 Alessandro Bravetti , Pablo Padilla

Generalizing the cyclically competing three-species model (often referred to as the rock-paper-scissors game), we consider a simple system of population dynamics without spatial structures that involves four species. Unlike the previous…

Populations and Evolution · Quantitative Biology 2011-01-06 Sara O. Case , Clinton H. Durney , Michel Pleimling , R. K. P. Zia

Real-world examples of periods of periodical organisms range from cicadas whose life-cycles are larger prime numbers, like 13 or 17, to bamboos whose periods are large multiples of small primes, like 40 or even 120. The periodicity is…

Populations and Evolution · Quantitative Biology 2021-10-13 Eric Goles , Ivan Slapničar , Marco A. Lardies

The classical chemostat is an intensely investigated model in ecology and bio/chemical engineering, where n-species, say $x_{1}, x_{2}...x_{n}$ compete for a single growth limiting nutrient. Classical theory predicts that depending on model…

Dynamical Systems · Mathematics 2024-06-24 Thomas Griffin , James Lathrop , Rana Parshad

The aim of this essay is to propose a conception of mathematics that is fully consonant with naturalism. By that I mean the hypothesis that everything that exists is part of the natural world, which makes up a unitary whole.

History and Philosophy of Physics · Physics 2015-06-12 Lee Smolin

The law of proportionate growth simply states that the time dependent change of a quantity $x$ is proportional to $x$. Its applicability to a wide range of dynamic phenomena is based on various assumptions for the proportionality factor,…

Physics and Society · Physics 2019-09-04 Frank Schweitzer

Economists and social scientists have debated the relative importance of nature (one's genes) and nurture (one's environment) for decades, if not centuries. This debate can now be informed by the ready availability of genetic data in a…

Critical, or scale independent, systems are so ubiquitous, that gaining theoretical insights on their nature and properties has many direct repercussions in social and natural sciences. In this report, we start from the simplest possible…

Physics and Society · Physics 2012-11-07 Laurent Hébert-Dufresne , Antoine Allard , Louis J. Dubé

We present a basis for studying questions of cause and effect in statistics which subsumes and reconciles the models proposed by Pearl, Robins, Rubin and others, and which, as far as mathematical notions and notation are concerned, is…

Statistics Theory · Mathematics 2023-04-18 José A. Ferreira

While probability theory is normally applied to external environments, there has been some recent interest in probabilistic modeling of the outputs of computations that are too expensive to run. Since mathematical logic is a powerful tool…

Artificial Intelligence · Computer Science 2016-10-10 Scott Garrabrant , Benya Fallenstein , Abram Demski , Nate Soares

Data Science and Machine learning have been growing strong for the past decade. We argue that to make the most of this exciting field we should resist the temptation of assuming that forecasting can be reduced to brute-force data analytics.…

Artificial Intelligence · Computer Science 2020-05-12 Hykel Hosni , Angelo Vulpiani

Theory and empirical science should be in constant dialogue, but often find it hard to understand one another. Here we describe a graduate-level university course we developed to improve matters. The course was designed to help…

Physics Education · Physics 2026-04-16 Joanna Masel , Anna Dornhaus

The problem of natural selection in dispersal-structured populations consisting of individuals characterized by different diffusion coefficients is studied. The competition between the organisms is taken into account through the assumption…

Adaptation and Self-Organizing Systems · Physics 2020-05-01 E. Heinsalu , D. Navidad Maeso , M. Patriarca

Goods, styles, ideologies are adopted by society through various mechanisms. In particular, adoption driven by innovation is extensively studied by marketing economics. Mathematical models are currently used to forecast the sales of…

Physics and Society · Physics 2014-04-02 Baptiste Coulmont , Virginie Supervie , Romulus Breban

Models of random phylogenetic networks have been used since the inception of the field, but the introduction and rigorous study of mathematically tractable models is a much more recent topic that has gained momentum in the last 5 years.…

Populations and Evolution · Quantitative Biology 2024-11-20 François Bienvenu

Competitive interactions represent one of the driving forces behind evolution and natural selection in biological and sociological systems. For example, animals in an ecosystem may vie for food or mates; in a market economy, firms may…

Physics and Society · Physics 2013-07-03 Jacobo Aguirre , David Papo , Javier M. Buldú

We study the population genetics of Evolution in the important special case of weak selection, in which all fitness values are assumed to be close to one another. We show that in this regime natural selection is tantamount to the…

Computer Science and Game Theory · Computer Science 2012-08-16 Erick Chastain , Adi Livnat , Christos Papadimitriou , Umesh Vazirani

Complex systems, such as life and languages, are governed by principles of evolution. The analogy and comparison between biology and linguistics\cite{alphafold2, RoseTTAFold, lang_virus, cell language, faculty1, language of gene, Protein…

Populations and Evolution · Quantitative Biology 2026-03-18 Li-Min Wang , Hsing-Yi Lai , Sun-Ting Tsai , Chen Siang Ng , Kevin Sheng-Kai Ma , Shan-Jyun Wu , Meng-Xue Tsai , Yi-Ching Su , Daw-Wei Wang , Tzay-Ming Hong

We investigate species-rich mathematical models of ecosystems. While much of the existing literature focuses on the properties of equilibrium fixed points, persistent dynamics (e.g., limit cycles or chaos) have also been observed, both in…

Adaptation and Self-Organizing Systems · Physics 2025-09-10 Robin Delabays , Philippe Jacquod

Competition for available resources is natural amongst coexisting species, and the fittest contenders dominate over the rest in evolution. The dynamics of this selection is studied using a simple linear model. It has similarities to…

Quantum Physics · Physics 2007-05-23 Apoorva Patel