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Ontologies and knowledge graphs require continuous evolution to remain comprehensive and accurate, but manual curation is labor intensive. Large Language Models (LLMs) possess vast unstructured knowledge but struggle with maintaining…

Artificial Intelligence · Computer Science 2025-07-30 Vishal Raman , Vijai Aravindh R

Pre-trained large language models (LMs) struggle to perform logical reasoning reliably despite advances in scale and compositionality. In this work, we tackle this challenge through the lens of symbolic programming. We propose DSR-LM, a…

Artificial Intelligence · Computer Science 2023-05-09 Hanlin Zhang , Jiani Huang , Ziyang Li , Mayur Naik , Eric Xing

The proliferation of time series foundation models has created a landscape where no single method achieves consistent superiority, framing the central challenge not as finding the best model, but as orchestrating an optimal ensemble with…

Artificial Intelligence · Computer Science 2025-12-19 Defu Cao , Michael Gee , Jinbo Liu , Hengxuan Wang , Wei Yang , Rui Wang , Yan Liu

Large Language Models excel at code generation yet struggle with complex programming tasks that demand sophisticated reasoning. To bridge this gap, traditional process supervision relies on learned reward models requiring costly training…

Computation and Language · Computer Science 2025-06-09 Zhuohao Yu , Weizheng Gu , Yidong Wang , Xingru Jiang , Zhengran Zeng , Jindong Wang , Wei Ye , Shikun Zhang

In the realm of machine learning, traditional model development and automated approaches like AutoML typically rely on layers of abstraction, such as tree-based or Cartesian genetic programming. Our study introduces "Guided Evolution" (GE),…

Neural and Evolutionary Computing · Computer Science 2024-07-18 Clint Morris , Michael Jurado , Jason Zutty

The art of heuristic design has traditionally been a human pursuit. While Large Language Models (LLMs) can generate code for search heuristics, their application has largely been confined to adjusting simple functions within human-crafted…

Artificial Intelligence · Computer Science 2025-09-03 Guorui Quan , Mingfei Sun , Manuel López-Ibáñez

Recent years have seen important advances in the building of interpretable models, machine learning models that are designed to be easily understood by humans. In this work, we show that large language models (LLMs) are remarkably good at…

Machine Learning · Computer Science 2024-02-23 Sebastian Bordt , Ben Lengerich , Harsha Nori , Rich Caruana

Large language models (LLMs) have shown great success in text modeling tasks across domains. However, natural language exhibits inherent semantic hierarchies and nuanced geometric structure, which current LLMs do not capture completely…

Machine Learning · Computer Science 2025-11-07 Neil He , Rishabh Anand , Hiren Madhu , Ali Maatouk , Smita Krishnaswamy , Leandros Tassiulas , Menglin Yang , Rex Ying

We consider the protein sequence engineering problem, which aims to find protein sequences with high fitness levels, starting from a given wild-type sequence. Directed evolution has been a dominating paradigm in this field which has an…

Machine Learning · Computer Science 2025-01-20 Yinkai Wang , Jiaxing He , Yuanqi Du , Xiaohui Chen , Jianan Canal Li , Li-Ping Liu , Xiaolin Xu , Soha Hassoun

Phenotype-driven gene prioritization is a critical process in the diagnosis of rare genetic disorders for identifying and ranking potential disease-causing genes based on observed physical traits or phenotypes. While traditional approaches…

Quantitative Methods · Quantitative Biology 2024-04-04 Junyoung Kim , Jingye Yang , Kai Wang , Chunhua Weng , Cong Liu

Stochastic embedding transitions introduce a probabilistic mechanism for adjusting token representations dynamically during inference, mitigating the constraints imposed through static or deterministic embeddings. A transition framework was…

Computation and Language · Computer Science 2025-08-11 Stefan Whitaker , Colin Sisate , Marcel Windsor , Nikolai Fairweather , Tarquin Goldborough , Oskar Lindenfeld

Large language models (LLMs) are increasingly used in various domains, showing impressive potential on different tasks. Recently, reasoning LLMs have been proposed to improve the \textit{reasoning} or \textit{thinking} capabilities of LLMs…

Artificial Intelligence · Computer Science 2025-10-22 Jiahao Yu , Zelei Cheng , Xian Wu , Xinyu Xing

Learning ensembles by bagging can substantially improve the generalization performance of low-bias, high-variance estimators, including those evolved by Genetic Programming (GP). To be efficient, modern GP algorithms for evolving (bagging)…

Neural and Evolutionary Computing · Computer Science 2021-02-08 Marco Virgolin

Despite their remarkable capabilities, large language models often struggle with tasks requiring complex reasoning and planning. While existing approaches like Chain-of-Thought prompting and tree search techniques show promise, they are…

Machine Learning · Computer Science 2025-02-12 Yang Li

Planning in complex environments requires an agent to efficiently query a world model to find a feasible sequence of actions from start to goal. Recent work has shown that Large Language Models (LLMs), with their rich prior knowledge and…

Artificial Intelligence · Computer Science 2024-12-10 Gonzalo Gonzalez-Pumariega , Wayne Chen , Kushal Kedia , Sanjiban Choudhury

The rapid growth of scientific techniques and knowledge is reflected in the exponential increase in new patents filed annually. While these patents drive innovation, they also present significant burden for researchers and engineers,…

Digital Libraries · Computer Science 2024-12-25 Suyuan Wang , Xueqian Yin , Menghao Wang , Ruofeng Guo , Kai Nan

Resource-management tasks in modern operating and distributed systems continue to rely primarily on hand-designed heuristics for tasks such as scheduling, caching, or active queue management. Designing performant heuristics is an expensive,…

Operating Systems · Computer Science 2026-01-01 Rohit Dwivedula , Divyanshu Saxena , Sujay Yadalam , Daehyeok Kim , Aditya Akella

Large language models (LLMs) have exhibited remarkable capabilities across a variety of domains and tasks, challenging our understanding of learning and cognition. Despite the recent success, current LLMs are not capable of processing…

This paper introduces MeLA, a Metacognitive LLM-Driven Architecture that presents a new paradigm for Automatic Heuristic Design (AHD). Traditional evolutionary methods operate directly on heuristic code; in contrast, MeLA evolves the…

Artificial Intelligence · Computer Science 2025-09-08 Zishang Qiu , Xinan Chen , Long Chen , Ruibin Bai

Spoken communication occurs in a "noisy channel" characterized by high levels of environmental noise, variability within and between speakers, and lexical and syntactic ambiguity. Given these properties of the received linguistic input,…

Computation and Language · Computer Science 2021-01-26 Stephan C. Meylan , Sathvik Nair , Thomas L. Griffiths
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