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Searching the vast chemical space for drug-like molecules that bind with a protein pocket is a challenging task in drug discovery. Recently, structure-based generative models have been introduced which promise to be more efficient by…

Machine Learning · Computer Science 2024-09-09 Tony Shen , Seonghwan Seo , Grayson Lee , Mohit Pandey , Jason R Smith , Artem Cherkasov , Woo Youn Kim , Martin Ester

Reliable uncertainty estimation is crucial for robust object detection in autonomous driving. However, previous works on probabilistic object detection either learn predictive probability for bounding box regression in an un-supervised…

Computer Vision and Pattern Recognition · Computer Science 2020-08-11 Di Feng , Lars Rosenbaum , Fabian Timm , Klaus Dietmayer

To create state-of-the-art models for many downstream tasks, it has become common practice to fine-tune a pre-trained large vision model. However, it remains an open question of how to best determine which of the many possible model…

Machine Learning · Computer Science 2025-12-08 Simon Guiroy , Mats Richter , Sarath Chandar , Christopher Pal

Deep learning models are being adopted and applied on various critical decision-making tasks, yet they are trained to provide point predictions without providing degrees of confidence. The trustworthiness of deep learning models can be…

Machine Learning · Computer Science 2024-10-28 Daniel Nolte , Souparno Ghosh , Ranadip Pal

Diffusion models achieve strong generative performance but remain slow at inference due to the need for repeated full-model denoising passes. We present Token-Adaptive Predictor (TAP), a training-free, probe-driven framework that adaptively…

Computer Vision and Pattern Recognition · Computer Science 2026-03-05 Haowei Zhu , Tingxuan Huang , Xing Wang , Tianyu Zhao , Jiexi Wang , Weifeng Chen , Xurui Peng , Fangmin Chen , Junhai Yong , Bin Wang

Most theoretically motivated work in the offline reinforcement learning setting requires precise uncertainty estimates. This requirement restricts the algorithms derived in that work to the tabular and linear settings where such estimates…

Machine Learning · Computer Science 2022-06-03 David Brandfonbrener , Remi Tachet des Combes , Romain Laroche

Supervised machine learning relies on the availability of good labelled data for model training. Labelled data is acquired by human annotation, which is a cumbersome and costly process, often requiring subject matter experts. Active…

Machine Learning · Computer Science 2023-10-31 Sharath M Shankaranarayana

Bayesian inference provides principled uncertainty quantification but is often limited by the challenges of prior and likelihood elicitation. The martingale posterior (MGP) (Fong et al., 2023) offers an alternative by replacing these…

Methodology · Statistics 2026-05-29 Kenyon Ng , Edwin Fong , David T. Frazier , Jeremias Knoblauch , Susan Wei

Tabular data underpins most high-value prediction problems in science and industry, and TabPFN has driven the foundation model revolution for this modality. Designed with feedback from our users, TabPFN-3 builds on this foundation to scale…

Emerging deep-learning (DL)-based techniques have significant potential to revolutionize biomedical imaging. However, one outstanding challenge is the lack of reliability assessment in the DL predictions, whose errors are commonly revealed…

Image and Video Processing · Electrical Eng. & Systems 2019-05-07 Yujia Xue , Shiyi Cheng , Yunzhe Li , Lei Tian

While most machine learning models can provide confidence in their predictions, confidence is insufficient to understand a prediction's reliability. For instance, the model may have a low confidence prediction if the input is not…

Machine Learning · Computer Science 2023-10-31 Mert Yuksekgonul , Linjun Zhang , James Zou , Carlos Guestrin

We propose a network architecture capable of reliably estimating uncertainty of regression based predictions without sacrificing accuracy. The current state-of-the-art uncertainty algorithms either fall short of achieving prediction…

Machine Learning · Computer Science 2022-02-22 Kinjal Patel , Steven Waslander

Neural networks (NNs) often assign high confidence to their predictions, even for points far out-of-distribution, making uncertainty quantification (UQ) a challenge. When they are employed to model interatomic potentials in materials…

Machine Learning · Computer Science 2023-12-27 Aik Rui Tan , Shingo Urata , Samuel Goldman , Johannes C. B. Dietschreit , Rafael Gómez-Bombarelli

Tabular foundation models, such as TabPFNv2 and TabICL, have recently dethroned gradient-boosted trees at the top of predictive benchmarks, demonstrating the value of in-context learning for tabular data. We introduce TabICLv2, a new…

Machine Learning · Computer Science 2026-02-12 Jingang Qu , David Holzmüller , Gaël Varoquaux , Marine Le Morvan

A widely recognized limitation of molecular prediction models is their reliance on structures observed in the training data, resulting in poor generalization to out-of-distribution compounds. Yet in drug discovery, the compounds most…

Machine Learning · Computer Science 2026-01-05 Jina Kim , Jeffrey Willette , Bruno Andreis , Sung Ju Hwang

The standard empirical risk minimization (ERM) can underperform on certain minority groups (i.e., waterbirds in lands or landbirds in water) due to the spurious correlation between the input and its label. Several studies have improved the…

Machine Learning · Computer Science 2022-12-15 Dongpin Oh , Dae Lee , Jeunghyun Byun , Bonggun Shin

Test Input Prioritizers (TIP) for Deep Neural Networks (DNN) are an important technique to handle the typically very large test datasets efficiently, saving computation and labeling costs. This is particularly true for large-scale, deployed…

Machine Learning · Computer Science 2022-05-25 Michael Weiss , Paolo Tonella

We consider the problem of deciding on sampling strategy, in particular sampling design. We propose a risk measure, whose minimizing value guides the choice. The method makes use of a superpopulation model and takes into account uncertainty…

Methodology · Statistics 2020-07-06 Edgar Bueno , Dan Hedlin

Modeling the interaction between proteins and ligands and accurately predicting their binding structures is a critical yet challenging task in drug discovery. Recent advancements in deep learning have shown promise in addressing this…

Machine Learning · Computer Science 2024-01-10 Qizhi Pei , Kaiyuan Gao , Lijun Wu , Jinhua Zhu , Yingce Xia , Shufang Xie , Tao Qin , Kun He , Tie-Yan Liu , Rui Yan

Machine learning (ML) systems are utilized in critical sectors, such as healthcare, law enforcement, and finance. However, these systems are often trained on historical data that contains demographic biases, leading to ML decisions that…

Machine Learning · Computer Science 2025-06-10 Jake Robertson , Noah Hollmann , Samuel Müller , Noor Awad , Frank Hutter