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Learning a faithful directed acyclic graph (DAG) from samples of a joint distribution is a challenging combinatorial problem, owing to the intractable search space superexponential in the number of graph nodes. A recent breakthrough…

Machine Learning · Computer Science 2019-04-24 Yue Yu , Jie Chen , Tian Gao , Mo Yu

Learning the structure of causal directed acyclic graphs (DAGs) is useful in many areas of machine learning and artificial intelligence, with wide applications. However, in the high-dimensional setting, it is challenging to obtain good…

Machine Learning · Statistics 2024-05-27 Stephen Smith , Qing Zhou

We study distance properties of a general class of random directed acyclic graphs (DAGs). In a DAG, many natural notions of distance are possible, for there exists multiple paths between pairs of nodes. The distance of interest for circuits…

Probability · Mathematics 2012-11-12 Nicolas Broutin , Omar Fawzi

In this paper, our goal is to characterize two graph classes based on the properties of minimal vertex (edge) separators. We first present a structural characterization of graphs in which every minimal vertex separator is a stable set. We…

Discrete Mathematics · Computer Science 2011-03-16 Mrinal Kumar , Gaurav Maheswari , N. Sadagopan

We define and study analogs of probabilistic tree embedding and tree cover for directed graphs. We define the notion of a DAG cover of a general directed graph $G$: a small collection $D_1,\dots D_g$ of DAGs so that for all pairs of…

Data Structures and Algorithms · Computer Science 2025-04-16 Sepehr Assadi , Gary Hoppenworth , Nicole Wein

Directed acyclic graphs (DAGs) with hidden variables are often used to characterize causal relations between variables in a system. When some variables are unobserved, DAGs imply a notoriously complicated set of constraints on the…

Machine Learning · Statistics 2023-02-23 Noam Finkelstein , Beata Zjawin , Elie Wolfe , Ilya Shpitser , Robert W. Spekkens

Notions of minimal sufficient causation are incorporated within the directed acyclic graph causal framework. Doing so allows for the graphical representation of sufficient causes and minimal sufficient causes on causal directed acyclic…

Statistics Theory · Mathematics 2009-06-10 Tyler J. VanderWeele , James M. Robins

The Minimum Path Cover problem on directed acyclic graphs (DAGs) is a classical problem that provides a clear and simple mathematical formulation for several applications in different areas and that has an efficient algorithmic solution. In…

Data Structures and Algorithms · Computer Science 2014-03-06 Niko Beerenwinkel , Stefano Beretta , Paola Bonizzoni , Riccardo Dondi , Yuri Pirola

We give methods for Bayesian inference of directed acyclic graphs, DAGs, and the induced causal effects from passively observed complete data. Our methods build on a recent Markov chain Monte Carlo scheme for learning Bayesian networks,…

Machine Learning · Computer Science 2020-11-19 Jussi Viinikka , Antti Hyttinen , Johan Pensar , Mikko Koivisto

We present a novel perspective and algorithm for learning directed acyclic graphs (DAGs) from data generated by a linear structural equation model (SEM). First, we show that a linear SEM can be viewed as a linear transform that, in prior…

Machine Learning · Computer Science 2024-06-21 Panagiotis Misiakos , Chris Wendler , Markus Püschel

Bayesian causal discovery offers the power to quantify epistemic uncertainties among a broad range of structurally diverse causal theories potentially explaining the data, represented in forms of directed acyclic graphs (DAGs). However,…

Machine Learning · Computer Science 2024-08-30 Nu Hoang , Bao Duong , Thin Nguyen

Directed acyclic graph (DAG) models are widely used to represent causal relationships among random variables in many application domains. This paper studies a special class of non-Gaussian DAG models, where the conditional variance of each…

Machine Learning · Statistics 2021-11-03 Wei Zhou , Xin He , Wei Zhong , Junhui Wang

Aligning sequencing reads on graph representations of genomes is an important ingredient of pan-genomics. Such approaches typically find a set of local anchors that indicate plausible matches between substrings of a read to subpaths of the…

Data Structures and Algorithms · Computer Science 2018-01-30 Anna Kuosmanen , Topi Paavilainen , Travis Gagie , Rayan Chikhi , Alexandru I. Tomescu , Veli Mäkinen

In this paper, we propose a novel inference method for dynamic genetic networks which makes it possible to face with a number of time measurements n much smaller than the number of genes p. The approach is based on the concept of low order…

Statistics Theory · Mathematics 2009-05-29 Sophie Lèbre

Graph-structured data ubiquitously appears in science and engineering. Graph neural networks (GNNs) are designed to exploit the relational inductive bias exhibited in graphs; they have been shown to outperform other forms of neural networks…

Machine Learning · Computer Science 2021-02-03 Veronika Thost , Jie Chen

Bayesian networks, with structure given by a directed acyclic graph (DAG), are a popular class of graphical models. However, learning Bayesian networks from discrete or categorical data is particularly challenging, due to the large…

Methodology · Statistics 2018-02-06 Jiaying Gu , Fei Fu , Qing Zhou

We explore if it is possible to learn a directed acyclic graph (DAG) from data without imposing explicitly the acyclicity constraint. In particular, for Gaussian distributions, we frame structural learning as a sparse matrix factorization…

Machine Learning · Statistics 2020-06-05 Gherardo Varando

Directed acyclic graphs (DAGs) are fundamental structures used across many scientific fields. A key concept in DAGs is the least common ancestor (LCA), which plays a crucial role in understanding hierarchical relationships. Surprisingly…

Our goal is to infer the topology of a network when (i) we can send probes between sources and receivers at the edge of the network and (ii) intermediate nodes can perform simple network coding operations, i.e., additions. Our key intuition…

Networking and Internet Architecture · Computer Science 2013-02-07 Pegah Sattari , Christina Fragouli , Athina Markopoulou

This paper explores the conditions for determining fixed nodes in structured networks, specifically focusing on directed acyclic graphs (DAGs). We introduce several necessary and sufficient conditions for determining fixed nodes in…

General Topology · Mathematics 2025-09-08 Nam-jin Park , Yeong-Ung Kim , Hyo-Sung Ahn