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Gene expression classification is a pivotal yet challenging task in bioinformatics, primarily due to the high dimensionality of genomic data and the risk of overfitting. To bridge this gap, we propose BOLIMES, a novel feature selection…

Machine Learning · Computer Science 2025-02-27 Bich-Chung Phan , Thanh Ma , Huu-Hoa Nguyen , Thanh-Nghi Do

Most feature selection algorithms, especially wrapper methods, run inefficiently on CPU based platforms because of their high computational complexity. This inefficiency makes them unsuitable for processing large scale datasets. To address…

Machine Learning · Computer Science 2026-05-12 Xurui Li , Zhiguo Gan , Jiaming Zhang , Zheng Liu , Diannan Lu

Gene selection is an important part of microarray data analysis because it provides information that can lead to a better mechanistic understanding of an investigated phenomenon. At the same time, gene selection is very difficult because of…

Machine Learning · Computer Science 2013-10-21 Miron B. Kursa

Gene prioritization (identifying genes potentially associated with a biological process) is increasingly tackled with Artificial Intelligence. However, existing methods struggle with the high dimensionality and incomplete labelling of…

In machine learning applications for online product offerings and marketing strategies, there are often hundreds or thousands of features available to build such models. Feature selection is one essential method in such applications for…

Machine Learning · Statistics 2019-08-16 Zhenyu Zhao , Radhika Anand , Mallory Wang

Microarray gene expression data are often accompanied by a large number of genes and a small number of samples. However, only a few of these genes are relevant to cancer, resulting in signigicant gene selection challenges. Hence, we propose…

Machine Learning · Computer Science 2021-06-11 Xiongshi Deng , Min Li , Shaobo Deng , Lei Wang

With the surge in data generation, both vertically (i.e., volume of data) and horizontally (i.e., dimensionality), the burden of the curse of dimensionality has become increasingly palpable. Feature selection, a key facet of dimensionality…

Machine Learning · Computer Science 2023-09-19 Hassan Gharoun , Navid Yazdanjoe , Mohammad Sadegh Khorshidi , Amir H. Gandomi

In this paper a hybrid feature selection method is proposed which takes advantages of wrapper subset evaluation with a lower cost and improves the performance of a group of classifiers. The method uses combination of sample domain filtering…

Machine Learning · Computer Science 2014-03-12 Mehdi Naseriparsa , Amir-Masoud Bidgoli , Touraj Varaee

The effectiveness of machine learning models is significantly affected by the size of the dataset and the quality of features as redundant and irrelevant features can radically degrade the performance. This paper proposes IGRF-RFE: a hybrid…

Machine Learning · Computer Science 2023-02-07 Yuhua Yin , Julian Jang-Jaccard , Wen Xu , Amardeep Singh , Jinting Zhu , Fariza Sabrina , Jin Kwak

Microarray cancer gene expression data comprise of very high dimensions. Reducing the dimensions helps in improving the overall analysis and classification performance. We propose two hybrid techniques, Biogeography - based Optimization -…

Neural and Evolutionary Computing · Computer Science 2016-11-18 Sarvesh Nikumbh , Shameek Ghosh , Valadi Jayaraman

Accurately identifying cancer samples is crucial for precise diagnosis and effective patient treatment. Traditional methods falter with high-dimensional and high feature-to-sample count ratios, which are critical for classifying cancer…

Machine Learning · Computer Science 2025-01-14 Tareque Mohmud Chowdhury , Farzana Tabassum , Sabrina Islam , Abu Raihan Mostofa Kamal

In this paper, a robust weighted score for unbalanced data (ROWSU) is proposed for selecting the most discriminative feature for high dimensional gene expression binary classification with class-imbalance problem. The method addresses one…

Machine Learning · Statistics 2024-01-24 Zardad Khan , Amjad Ali , Saeed Aldahmani

Introduction: Feature selection and gene set analysis are of increasing interest in bioinformatics. While these two approaches have been developed for different purposes, we describe how some gene set analysis methods can be used to conduct…

Methodology · Statistics 2015-11-30 Suyan Tian , Chi Wang , Howard H. Chang

In recent years the importance of finding a meaningful pattern from huge datasets has become more challenging. Data miners try to adopt innovative methods to face this problem by applying feature selection methods. In this paper we propose…

Machine Learning · Computer Science 2014-03-11 Mehdi Naseriparsa , Amir-masoud Bidgoli , Touraj Varaee

How to accurately measure the relevance and redundancy of features is an age-old challenge in the field of feature selection. However, existing filter-based feature selection methods cannot directly measure redundancy for continuous data.…

Machine Learning · Computer Science 2023-07-31 Haitao Nie , Shengbo Zhang , Bin Xie

Understanding the results of deep neural networks is an essential step towards wider acceptance of deep learning algorithms. Many approaches address the issue of interpreting artificial neural networks, but often provide divergent…

Machine Learning · Computer Science 2021-11-16 Vadim Borisov , Johannes Meier , Johan van den Heuvel , Hamed Jalali , Gjergji Kasneci

Training automatic speech recognition (ASR) models increasingly relies on decentralized federated learning to ensure data privacy and accessibility, producing multiple local models that require effective merging. In hybrid ASR systems,…

Computation and Language · Computer Science 2026-03-06 Mengze Hong , Yi Gu , Di Jiang , Hanlin Gu , Chen Jason Zhang , Lu Wang , Zhiyang Su

Analyzing large datasets to select optimal features is one of the most important research areas in machine learning and data mining. This feature selection procedure involves dimensionality reduction which is crucial in enhancing the…

Neural and Evolutionary Computing · Computer Science 2024-09-24 Zhila Yaseen Taha , Abdulhady Abas Abdullah , Tarik A. Rashid

While building machine learning models, Feature selection (FS) stands out as an essential preprocessing step used to handle the uncertainty and vagueness in the data. Recently, the minimum Redundancy and Maximum Relevance (mRMR) approach…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-07-25 Yelleti Vivek , P. S. V. S. Sai Prasad

Microarray is a technology to quantitatively monitor the expression of large number of genes in parallel. It has become one of the main tools for global gene expression analysis in molecular biology research in recent years. The large…

Quantitative Methods · Quantitative Biology 2015-06-18 Min Xu
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