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The health and function of tissue rely on its vasculature network to provide reliable blood perfusion. Volumetric imaging approaches, such as multiphoton microscopy, are able to generate detailed 3D images of blood vessels that could…

Computer Vision and Pattern Recognition · Computer Science 2019-06-19 Mohammad Haft-Javaherian , Linjing Fang , Victorine Muse , Chris B. Schaffer , Nozomi Nishimura , Mert R. Sabuncu

Due to the absence of a single standardized imaging protocol, domain shift between data acquired from different sites is an inherent property of medical images and has become a major obstacle for large-scale deployment of learning-based…

Computer Vision and Pattern Recognition · Computer Science 2023-08-15 Dewei Hu , Hao Li , Han Liu , Xing Yao , Jiacheng Wang , Ipek Oguz

Creating a dataset for training supervised machine learning algorithms can be a demanding task. This is especially true for medical image segmentation since one or more specialists are usually required for image annotation, and creating…

Computer Vision and Pattern Recognition · Computer Science 2024-10-28 Matheus Viana da Silva , Natália de Carvalho Santos , Julie Ouellette , Baptiste Lacoste , Cesar Henrique Comin

Medical image segmentation plays an important role in clinical decision making, treatment planning, and disease tracking. However, it still faces two major challenges. On the one hand, there is often a ``soft boundary'' between foreground…

Image and Video Processing · Electrical Eng. & Systems 2024-12-12 Mengqi Lei , Haochen Wu , Xinhua Lv , Xin Wang

The retinal vascular condition is a reliable biomarker of several ophthalmologic and cardiovascular diseases, so automatic vessel segmentation may be crucial to diagnose and monitor them. In this paper, we propose a novel method that…

Image and Video Processing · Electrical Eng. & Systems 2018-12-21 Américo Oliveira , Sérgio Pereira , Carlos A. Silva

In clinical practice, regions of interest in medical imaging often need to be identified through a process of precise image segmentation. The quality of this image segmentation step critically affects the subsequent clinical assessment of…

Image and Video Processing · Electrical Eng. & Systems 2021-03-23 João B. S. Carvalho , João A. Santinha , Đorđe Miladinović , Joachim M. Buhmann

Unsupervised domain adaptation (UDA) between two significantly disparate domains to learn high-level semantic alignment is a crucial yet challenging task.~To this end, in this work, we propose exploiting low-level edge information to…

Computer Vision and Pattern Recognition · Computer Science 2022-01-14 Xiaofeng Liu , Fangxu Xing , Georges El Fakhri , Jonghye Woo

Intracranial arteries are critical blood vessels that supply the brain with oxygenated blood. Intracranial artery labels provide valuable guidance and navigation to numerous clinical applications and disease diagnoses. Various machine…

Image and Video Processing · Electrical Eng. & Systems 2022-11-02 Yaxin Zhu , Peisheng Qian , Ziyuan Zhao , Zeng Zeng

Accurate medical image segmentation is fundamental to precision medicine, yet robust delineation remains challenging under heterogeneous appearances, ambiguous boundaries, and large anatomical variability. Similar intensity and texture…

Computer Vision and Pattern Recognition · Computer Science 2026-05-15 Zhiquan Chen , Haitao Wang , Guowei Zou , Hejun Wu

A versatile medical image segmentation model applicable to images acquired with diverse equipment and protocols can facilitate model deployment and maintenance. However, building such a model typically demands a large, diverse, and fully…

Computer Vision and Pattern Recognition · Computer Science 2024-04-02 Xiaoyang Chen , Hao Zheng , Yuemeng Li , Yuncong Ma , Liang Ma , Hongming Li , Yong Fan

Segmenting 3D blood vessels is a critical yet challenging task in medical image analysis. This is due to significant imaging modality-specific variations in artifacts, vascular patterns and scales, signal-to-noise ratios, and background…

Image and Video Processing · Electrical Eng. & Systems 2025-03-18 Bastian Wittmann , Yannick Wattenberg , Tamaz Amiranashvili , Suprosanna Shit , Bjoern Menze

Medical image segmentation has advanced rapidly over the past two decades, largely driven by deep learning, which has enabled accurate and efficient delineation of cells, tissues, organs, and pathologies across diverse imaging modalities.…

Image and Video Processing · Electrical Eng. & Systems 2025-08-29 Guoping Xu , Jayaram K. Udupa , Jax Luo , Songlin Zhao , Yajun Yu , Scott B. Raymond , Hao Peng , Lipeng Ning , Yogesh Rathi , Wei Liu , You Zhang

Liver vessel segmentation in magnetic resonance imaging data is important for the computational analysis of vascular remodelling, associated with a wide spectrum of diffuse liver diseases. Existing approaches rely on contrast enhanced…

Computer Vision and Pattern Recognition · Computer Science 2025-09-08 Daniel Sobotka , Alexander Herold , Matthias Perkonigg , Lucian Beer , Nina Bastati , Alina Sablatnig , Ahmed Ba-Ssalamah , Georg Langs

Deep learning has made significant strides in automated brain tumor segmentation from magnetic resonance imaging (MRI) scans in recent years. However, the reliability of these tools is hampered by the presence of poor-quality segmentation…

Image and Video Processing · Electrical Eng. & Systems 2025-07-08 Peijie Qiu , Satrajit Chakrabarty , Phuc Nguyen , Soumyendu Sekhar Ghosh , Aristeidis Sotiras

Semantic segmentation of blood vessels is an important task in medical image analysis, but its progress is often hindered by the scarcity of large annotated datasets and the poor generalization of models across different imaging modalities.…

Computer Vision and Pattern Recognition · Computer Science 2025-11-03 Cesar H. Comin , Wesley N. Galvão

Brains with complex distortion of cerebral anatomy present several challenges to automatic tissue segmentation methods of T1-weighted MR images. First, the very high variability in the morphology of the tissues can be incompatible with the…

Tissues and Organs · Quantitative Biology 2020-03-25 Gabriele Amorosino , Denis Peruzzo , Pietro Astolfi , Daniela Redaelli , Paolo Avesani , Filippo Arrigoni , Emanuele Olivetti

One of the most common tasks in medical imaging is semantic segmentation. Achieving this segmentation automatically has been an active area of research, but the task has been proven very challenging due to the large variation of anatomy…

Computer Vision and Pattern Recognition · Computer Science 2018-04-10 Holger R. Roth , Chen Shen , Hirohisa Oda , Masahiro Oda , Yuichiro Hayashi , Kazunari Misawa , Kensaku Mori

Brain lesion segmentation plays an essential role in neurological research and diagnosis. As brain lesions can be caused by various pathological alterations, different types of brain lesions tend to manifest with different characteristics…

Image and Video Processing · Electrical Eng. & Systems 2024-07-17 Xinru Zhang , Ni Ou , Berke Doga Basaran , Marco Visentin , Mengyun Qiao , Renyang Gu , Cheng Ouyang , Yaou Liu , Paul M. Matthew , Chuyang Ye , Wenjia Bai

Deep learning for medical imaging suffers from temporal and privacy-related restrictions on data availability. To still obtain viable models, continual learning aims to train in sequential order, as and when data is available. The main…

Image and Video Processing · Electrical Eng. & Systems 2021-07-27 Marius Memmel , Camila Gonzalez , Anirban Mukhopadhyay

PET imaging is an invaluable tool in clinical settings as it captures the functional activity of both healthy anatomy and cancerous lesions. Developing automatic lesion segmentation methods for PET images is crucial since manual lesion…

Image and Video Processing · Electrical Eng. & Systems 2024-11-05 Tanya Gatsak , Kumar Abhishek , Hanene Ben Yedder , Saeid Asgari Taghanaki , Ghassan Hamarneh