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Related papers: EMR-AGENT: Automating Cohort and Feature Extractio…

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Tabular data is often hidden in text, particularly in medical diagnostic reports. Traditional machine learning (ML) models designed to work with tabular data, cannot effectively process information in such form. On the other hand, large…

Machine Learning · Computer Science 2023-06-09 Aleksa Bisercic , Mladen Nikolic , Mihaela van der Schaar , Boris Delibasic , Pietro Lio , Andrija Petrovic

Objective Electronic health records (EHRs) are a promising source of data for health outcomes research in oncology. A challenge in using EHR data is that selecting cohorts of patients often requires information in unstructured parts of the…

Echocardiography interpretation requires integrating multi-view temporal evidence with quantitative measurements and guideline-grounded reasoning, yet existing foundation-model pipelines largely solve isolated subtasks and fail when tool…

Artificial Intelligence · Computer Science 2026-03-17 Moein Heidari , Ali Mehrabian , Mohammad Amin Roohi , Wenjin Chen , David J. Foran , Jasmine Grewal , Ilker Hacihaliloglu

Electronic Health Records (EHRs), comprising diverse clinical data such as diagnoses, medications, and laboratory results, hold great promise for translational research. EHR-derived data have advanced disease prevention, improved clinical…

Machine Learning · Statistics 2025-09-09 Yinjie Wang , Doudou Zhou , Yue Liu , Junwei Lu , Tianxi Cai

Modern GUI agents typically rely on a model-centric and step-wise interaction paradigm, where LLMs must re-interpret the UI and re-decide actions at every screen, which is fragile in long-horizon tasks. In this paper, we propose Executable…

Artificial Intelligence · Computer Science 2026-05-13 Zerui Qin , Sheng Yue , Xingyuan Hua , Yongjian Fu , Ju Ren

Association Rule Mining (ARM) is the task of learning associations among data features in the form of logical rules. Mining association rules from high-dimensional numerical data, for example, time series data from a large number of sensors…

Machine Learning · Computer Science 2024-03-28 Erkan Karabulut , Victoria Degeler , Paul Groth

Biomedical documents such as Electronic Health Records (EHRs) contain a large amount of information in an unstructured format. The data in EHRs is a hugely valuable resource documenting clinical narratives and decisions, but whilst the text…

Computation and Language · Computer Science 2019-12-24 Zeljko Kraljevic , Daniel Bean , Aurelie Mascio , Lukasz Roguski , Amos Folarin , Angus Roberts , Rebecca Bendayan , Richard Dobson

Electronic medical records (EMRs) are stored in relational databases. It can be challenging to access the required information if the user is unfamiliar with the database schema or general database fundamentals. Hence, researchers have…

Computation and Language · Computer Science 2023-03-24 Richard Tarbell , Kim-Kwang Raymond Choo , Glenn Dietrich , Anthony Rios

Automatically extracting workflows as procedural graphs from natural language is promising yet underexplored, demanding both structural validity and logical alignment. While recent large language models (LLMs) show potential for procedural…

Artificial Intelligence · Computer Science 2026-01-28 Wangyang Ying , Yanchi Liu , Xujiang Zhao , Wei Cheng , Zhengzhang Chen , Wenchao Yu , Yanjie Fu , Haifeng Chen

Current clinical agent built on small LLMs, such as TxAgent suffer from a \textit{Context Utilization Failure}, where models successfully retrieve biomedical evidence due to supervised finetuning but fail to ground their diagnosis in that…

Artificial Intelligence · Computer Science 2025-12-08 Ting-Ting Xie , Yixin Zhang

We present RAM-EHR, a Retrieval AugMentation pipeline to improve clinical predictions on Electronic Health Records (EHRs). RAM-EHR first collects multiple knowledge sources, converts them into text format, and uses dense retrieval to obtain…

Computation and Language · Computer Science 2024-07-30 Ran Xu , Wenqi Shi , Yue Yu , Yuchen Zhuang , Bowen Jin , May D. Wang , Joyce C. Ho , Carl Yang

Large language models (LLMs) are increasingly used to extract clinical data from electronic health records (EHRs), offering significant improvements in scalability and efficiency for real-world data (RWD) curation in oncology. However, the…

The utilization of Electronic Health Records (EHRs) for clinical risk prediction is on the rise. However, strict privacy regulations limit access to comprehensive health records, making it challenging to apply standard machine learning…

Computation and Language · Computer Science 2023-12-08 Angeela Acharya , Sulabh Shrestha , Anyi Chen , Joseph Conte , Sanja Avramovic , Siddhartha Sikdar , Antonios Anastasopoulos , Sanmay Das

Medical Decision-Making (MDM) is a complex process requiring substantial domain-specific expertise to effectively synthesize heterogeneous and complicated clinical information. While recent advancements in Large Language Models (LLMs) show…

Artificial Intelligence · Computer Science 2025-08-20 Liuxin Bao , Zhihao Peng , Xiaofei Zhou , Runmin Cong , Jiyong Zhang , Yixuan Yuan

Modern Internet applications often produce a large volume of user activity records. Data analysts are interested in cohort analysis, or finding unusual user behavioral trends, in these large tables of activity records. In a traditional…

Databases · Computer Science 2016-05-05 Dawei Jiang , Qingchao Cai , Gang Chen , H. V. Jagadish , Beng Chin Ooi , Kian-Lee Tan , Anthony K. H. Tung

The large amount of time clinicians spend sifting through patient notes and documenting in electronic health records (EHRs) is a leading cause of clinician burnout. By proactively and dynamically retrieving relevant notes during the…

Information Retrieval · Computer Science 2023-08-17 Sharon Jiang , Shannon Shen , Monica Agrawal , Barbara Lam , Nicholas Kurtzman , Steven Horng , David Karger , David Sontag

Predicting the patient's clinical outcome from the historical electronic medical records (EMR) is a fundamental research problem in medical informatics. Most deep learning-based solutions for EMR analysis concentrate on learning the…

Machine Learning · Computer Science 2019-11-28 Liantao Ma , Chaohe Zhang , Yasha Wang , Wenjie Ruan , Jiantao Wang , Wen Tang , Xinyu Ma , Xin Gao , Junyi Gao

Electronic health record (EHR) data is an essential data source for machine learning for health, but researchers and clinicians face steep barriers in extracting and validating EHR data for modeling. Existing tools incur trade-offs between…

Human-Computer Interaction · Computer Science 2025-11-13 Ziyong Ma , Richard D. Boyce , Adam Perer , Venkatesh Sivaraman

Artificial intelligence (AI) has demonstrated significant potential in transforming healthcare through the analysis and modeling of electronic health records (EHRs). However, the inherent heterogeneity, temporal irregularity, and…

Machine Learning · Computer Science 2025-07-18 Weijieying Ren , Jingxi Zhu , Zehao Liu , Tianxiang Zhao , Vasant Honavar

Existing AI-generated text detection methods heavily depend on large annotated datasets and external threshold tuning, restricting interpretability, adaptability, and zero-shot effectiveness. To address these limitations, we propose…

Computation and Language · Computer Science 2025-05-22 Jiatao Li , Mao Ye , Cheng Peng , Xunjian Yin , Xiaojun Wan
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